RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LALBAP00709 142 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 F9P00740 461 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ELK4P28324 431 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GTF2E2P29084 291 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 FASTKD3Q14CZ7 662 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 SF3A2Q15428 464 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 LCN8Q6JVE9 175 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RTL4Q6ZR62 310 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 METTL23Q86XA0 190 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 DCP1BQ8IZD4 617 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 OR1M1Q8NGA1 313 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 OR52L1Q8NGH7 329 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 OR6B3Q8NGW1 331 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ACSF2Q96CM8 615 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 LRRC58Q96CX6 371 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 NGLY1Q96IV0 654 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MGME1Q9BQP7 344 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 AGPAT4Q9NRZ5 378 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TMEM45AQ9NWC5 275 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TSPOAP1O95153 1857 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 C1QBP02746 253 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GSTM1P09488 218 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 JUPP14923 745 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HLA-DMAP28067 261 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RFC4P35249 363 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SOAT1P35610 550 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RPL4P36578 427 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 GPR19Q15760 415 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GRK1Q15835 563 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GPR158Q5T848 1215 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GALNT5Q7Z7M9 940 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 REPS1Q96D71 796 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PCDHB18PQ96TA0 734 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RIOK2Q9BVS4 552 aaKnown RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 HOXD1Q9GZZ0 328 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MTFR1LQ9H019 292 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SFMBT1Q9UHJ3 866 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PTPRUQ92729 1446 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 A0A1W2PPL8 197 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 BANF1O75531 89 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CNTN5O94779 1100 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HLA-DPB1P04440 258 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PON3Q15166 354 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HSDL2Q6YN16 418 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 C3P1Q6ZMU1 363 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PHB2Q99623 299 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TBCDQ9BTW9 1192 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 KIF13AQ9H1H9 1805 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SOCS2O14508 198 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SEC22BO75396 215 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FABP1P07148 127 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TYRP14679 529 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 HOXA10P31260 410 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 MAGEA6P43360 314 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ARHGDIBP52566 201 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MCCD1P59942 119 aaPredicted RBP6.17□□□□□ -1.42
CLK3-212ENST00000563418 ERVK-25P63136 954 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TRAM1Q15629 374 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 GPRIN3Q6ZVF9 776 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ZBTB33Q86T24 672 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TNFRSF25Q93038 417 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PNMA5Q96PV4 448 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 DNAJC5Q9H3Z4 198 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ABCB8Q9NUT2 735 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 DYRK1BQ9Y463 629 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RB1P06400 928 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CSH1P0DML2 217 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 CSH2P0DML3 217 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC2A3P11169 496 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 RFC2P35250 354 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 PEX6Q13608 980 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 VPS26BQ4G0F5 336 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 SLC9B1Q4ZJI4 515 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 TMEM179Q6ZVK1 233 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 YIPF7Q8N8F6 280 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 MUL1Q969V5 352 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 FOPNLQ96NB1 174 aa6.17□□□□□ -1.42
CLK3-212ENST00000563418 ASTN1O14525 1302 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 LRRN3E7EW58 273 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CYB561D2O14569 222 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 ZNF143P52747 638 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 AIF1P55008 147 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 SLC12A3P55017 1021 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 OSTNP61366 133 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 RBP5P82980 135 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CBWD6Q4V339 395 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CBWD3Q5JTY5 395 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CBWD5Q5RIA9 395 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 AKR1C8PQ5T2L2 129 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 FAM117BQ6P1L5 589 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 FAM220AQ7Z4H9 259 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 WDR53Q7Z5U6 358 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 PSTKQ8IV42 348 aaKnown RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 ZNF675Q8TD23 568 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 QRFPRQ96P65 431 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 OR51E2Q9H255 320 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 LRRN3Q9H3W5 708 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 MAGIXQ9H6Y5 334 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms