RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ASB14A6NK59 587 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 SMTNL1A8MU46 457 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ZIC3O60481 467 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 CCNDBP1O95273 360 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 PLEKHA8P1O95397 391 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TFP02787 698 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ITGAXP20702 1163 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 EDN2P20800 178 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 CASTP20810 708 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 PSMA5P28066 241 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 STX2P32856 288 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 RAD23BP54727 409 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 RPS6P62753 249 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ZBED6P86452 979 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 BAATQ14032 418 aaPredicted RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 RNPS1Q15287 305 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 SF3B4Q15427 424 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 USH1GQ495M9 461 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 FAM69BQ5VUD6 431 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TXNDC8Q6A555 127 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 FAM122CQ6P4D5 195 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 RHBDF2Q6PJF5 856 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ARMCX2Q7L311 632 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 PXKQ7Z7A4 578 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 PGBD5Q8N414 524 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 SRBD1Q8N5C6 995 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ZNF114Q8NC26 417 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 LILRB1Q8NHL6 650 aaPredicted RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 KLHL15Q96M94 604 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ZMAT2Q96NC0 199 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ZNF385AQ96PM9 386 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 HEMGNQ9BXL5 484 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TXLNGYQ9BZA5 131 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 DDX31Q9H8H2 851 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 RBM28Q9NW13 759 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 ADD3Q9UEY8 706 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 A4GNTQ9UNA3 340 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TMEM5Q9Y2B1 443 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 MRPL11Q9Y3B7 192 aaKnown RBP4.85□□□□□ -1.63
LINC00254-201ENST00000563416 SNX9Q9Y5X1 595 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TET1Q8NFU7 2136 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 TRIOBPQ9H2D6 2365 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 MYH11P35749 1972 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 NLRC5Q86WI3 1866 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 SYNRGQ9UMZ2 1314 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 DNM1LO00429 736 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 DUSP11O75319 330 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 PORP16435 677 aaPredicted RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 AGAP20933 346 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 HNRNPH1P31943 449 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 ACTN2P35609 894 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 KRT83P78385 493 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 EEF1A2Q05639 463 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 GRSF1Q12849 480 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 DLG1Q12959 904 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 GRIK3Q13003 919 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 CHAF1BQ13112 559 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 TBCEQ15813 527 aaPredicted RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 FAM69AQ5T7M9 428 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 LINGO2Q7L985 606 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 NOXA1Q86UR1 476 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 RBMXL3Q8N7X1 1067 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 ZNF713Q8N859 430 aaPredicted RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 ETNPPLQ8TBG4 499 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 SAAL1Q96ER3 474 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 BICD1Q96G01 975 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 FEM1CQ96JP0 617 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 KXD1Q9BQD3 176 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 UPF3BQ9BZI7 483 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 UPF3AQ9H1J1 476 aaKnown RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 MUC13Q9H3R2 512 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 RETREG1Q9H6L5 497 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 VAT1LQ9HCJ6 419 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 PXMP2Q9NR77 195 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 SMARCAL1Q9NZC9 954 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 MALT1Q9UDY8 824 aa4.84□□□□□ -1.63
LINC00254-201ENST00000563416 MAGED1Q9Y5V3 778 aaPredicted RBP4.84□□□□□ -1.63
LINC00254-201ENST00000563416 LAMA3Q16787 3333 aa4.84□□□□□ -1.64
LINC00254-201ENST00000563416 SAA2-SAA4A0A096LPE2 208 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 A0A1B0GUV1 79 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 MAGEA13PA6NCF6 341 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SRRM3A6NNA2 597 aaPredicted RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 NPIPB11E5RHQ5 1161 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 TAF4O00268 1085 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 MEIS2O14770 477 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 CTAGE5O15320 804 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SNRNP70P08621 437 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 HOXB5P09067 269 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 DDX5P17844 614 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 CALML3P27482 149 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 EPHA8P29322 1005 aaPredicted RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SSTR2P30874 369 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 ABCD1P33897 745 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 CTNNA1P35221 906 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 METAP2P50579 478 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 EFNA5P52803 228 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 MRPL12P52815 198 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms