RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GSAPA4D1B5 854 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PRSS56P0CW18 603 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PYGMP11217 842 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ATP1B2P14415 290 aaPredicted RBP16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PVRP15151 417 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PDHA2P29803 388 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PREPP48147 710 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 LMAN1P49257 510 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PRKAA1Q13131 559 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 KRT33BQ14525 404 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PTCHD3Q3KNS1 767 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 FHL5Q5TD97 284 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ANKRD20A3Q5VUR7 823 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 JMJD6Q6NYC1 403 aaPredicted RBP16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ACTL9Q8TC94 416 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 DCUN1D1Q96GG9 259 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 RBM41Q96IZ5 413 aaKnown RBP16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 TRAPPC9Q96Q05 1148 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 FERD3LQ96RJ6 166 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 FAM118BQ9BPY3 351 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 MFRPQ9BY79 579 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 SRMSQ9H3Y6 488 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 COG4Q9H9E3 785 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 ACTR5Q9H9F9 607 aaPredicted RBP16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 FANCEQ9HB96 536 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 HEBP2Q9Y5Z4 205 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 UNC79Q9P2D8 2635 aa16.3■□□□□ 0.2
HDGFL3-203ENST00000563404 RP1L1Q8IWN7 2480 aaPredicted RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 IGLV3-16A0A075B6K0 115 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 C17orf113A0A1B0GUU1 675 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 A6NL46 340 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 AKR1B15C9JRZ8 316 aaPredicted RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF185O15231 689 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 AGFG2O95081 481 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 MSL3P1P0C860 447 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 VAV2P52735 878 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 SPARCL1Q14515 664 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF385CQ66K41 422 aaPredicted RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 ITPRIPL1Q6GPH6 555 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 C11orf63Q6NUN7 778 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 CDHR3Q6ZTQ4 885 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 SNX20Q7Z614 316 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 CNGA4Q8IV77 575 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 RBMXL3Q8N7X1 1067 aaKnown RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 OR52E1Q8NGJ3 308 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 ULK4Q96C45 1275 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 COPS8Q99627 209 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 TFB2MQ9H5Q4 396 aaKnown RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 XKR8Q9H6D3 395 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 PLEKHB1Q9UF11 243 aaPredicted RBP16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF451Q9Y4E5 1061 aa16.29■□□□□ 0.2
HDGFL3-203ENST00000563404 MATN2O00339 956 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 HCRTR1O43613 425 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 LDB2O43679 373 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 RALBP11234 206 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 ITGALP20701 1170 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 CYP2A7P20853 494 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 ATP1A4Q13733 1029 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 ADGRF3Q8IZF5 1079 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 GLIS1Q8NBF1 620 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 CCDC110Q8TBZ0 833 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 DNAJC1Q96KC8 554 aaKnown RBP16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 TBL1YQ9BQ87 522 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 SYTL2Q9HCH5 934 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 ZDHHC3Q9NYG2 299 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 AAR2Q9Y312 384 aaKnown RBP16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 PCDHGB7Q9Y5F8 929 aa16.28■□□□□ 0.2
HDGFL3-203ENST00000563404 TRBV5-4A0A0C4DH59 114 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 H3BMH7 237 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 KCNN4O15554 427 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF749O43361 778 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 CRTAMO95727 393 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 MC4RP32245 332 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 EIF3EP60228 445 aaKnown RBP16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 PRKG2Q13237 762 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 MRPL49Q13405 166 aaKnown RBP16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 RAPSNQ13702 412 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 NCF4Q15080 339 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 SLC6A19Q695T7 634 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 AADACL2Q6P093 401 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 KLHDC8BQ8IXV7 354 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 TC2NQ8N9U0 490 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 SSC4DQ8WTU2 575 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 ARNT2Q9HBZ2 717 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 FAM60AQ9NP50 221 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 ACTR10Q9NZ32 417 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 SERTAD3Q9UJW9 196 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 PCDHA13Q9Y5I0 950 aa16.27■□□□□ 0.2
HDGFL3-203ENST00000563404 NOTCH2Q04721 2471 aa16.26■□□□□ 0.19
HDGFL3-203ENST00000563404 SEC16AO15027 2179 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms