RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PM20D2Q8IYS1 436 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 NAGSQ8N159 534 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 CHCHD4Q8N4Q1 142 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 EMC1Q8N766 993 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 NAT8LQ8N9F0 302 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 TSPAN14Q8NG11 270 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 OR2AJ1Q8NGZ0 328 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 UTP15Q8TED0 518 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SORCS1Q8WY21 1168 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 DNASE2BQ8WZ79 361 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SNX21Q969T3 373 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SPDL1Q96EA4 605 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 CDCA5Q96FF9 252 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 LMLNQ96KR4 655 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 PRMT6Q96LA8 375 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 CFAP57Q96MR6 1250 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 IL17FQ96PD4 163 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SPAG5Q96R06 1193 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 GFI1Q99684 422 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 TUBA1CQ9BQE3 449 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC25A23Q9BV35 468 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 DENND2DQ9H6A0 471 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 NOL11Q9H8H0 719 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 COPS7BQ9H9Q2 264 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 ARGLU1Q9NWB6 273 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 OSER1Q9NX31 292 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 DDX43Q9NXZ2 648 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 MTRRQ9UBK8 725 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 DDX25Q9UHL0 483 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 KCNS2Q9ULS6 477 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 WBP11Q9Y2W2 641 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 LIPGQ9Y5X9 500 aa3.13□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM86B1E9PN63 330 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM178BH3BS89 294 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 TRIM77I1YAP6 450 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 LDB3O75112 727 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 TOMM70O94826 608 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM86B2P0C5J1 330 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SUPT20HL2P0C7V6 817 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ITGA2P17301 1181 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 PCGF2P35227 344 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ATP6V1E1P36543 226 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 KCNJ1P48048 391 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 CTSCP53634 463 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 EEF1A1P68104 462 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SIRPAP78324 504 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 EEF1A2Q05639 463 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 RBPJQ06330 500 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SCN1BQ07699 218 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE2BQ13066 116 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 RCN2Q14257 317 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF273Q14593 569 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 IZUMO4Q1ZYL8 232 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 VWC2Q2TAL6 325 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE2EQ4V326 116 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 C9orf50Q5SZB4 431 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 RNASEH2BQ5TBB1 312 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 EEF1A1P5Q5VTE0 462 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ZDHHC20Q5W0Z9 365 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM109BQ6ICB4 259 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE2AQ6NT46 116 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 UNQ6126/PRO20091Q6UXV3 157 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ASB18Q6ZVZ8 466 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ERN2Q76MJ5 926 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 TMPRSS12Q86WS5 348 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 MAP7D3Q8IWC1 876 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 KLHL7Q8IXQ5 586 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 CEP57L1Q8IYX8 460 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SYCP3Q8IZU3 236 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ANKRD13CQ8N6S4 541 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 KCNH5Q8NCM2 988 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 OR10S1Q8NGN2 331 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC38A5Q8WUX1 472 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 MR1Q95460 341 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ERLEC1Q96DZ1 483 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 OTUB1Q96FW1 271 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 FAM81BQ96LP2 452 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF582Q96NG8 517 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 SYT17Q9BSW7 474 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ABHD6Q9BV23 337 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ANKZF1Q9H8Y5 726 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF556Q9HAH1 456 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 PRMT7Q9NVM4 692 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 MDFICQ9P1T7 246 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 RHCGQ9UBD6 479 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 GAGE2DQ9UEU5 116 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 DLGAP4Q9Y2H0 992 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 OR2W1Q9Y3N9 320 aa3.12□□□□□ -1.91
SHCBP1-202ENST00000563219 PRAG1Q86YV5 1406 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 ZCWPW2A0A1B0GU75 182 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 DENND3A2RUS2 1198 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 CTAGE9A4FU28 777 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 ANKUB1A6NFN9 424 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 NDUFS4O43181 175 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 SSX4O60224 188 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 GOSR1O95249 250 aa3.11□□□□□ -1.91
SHCBP1-202ENST00000563219 KRT19P08727 400 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms