RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 EEF2KO00418 725 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 NOS1APO75052 506 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 FADS2O95864 444 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 CD36P16671 472 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 DNAJB1P25685 340 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 STK11Q15831 433 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 SYT6Q5T7P8 510 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 LARP4Q71RC2 724 aaKnown RBP eCLIP13.81□□□□□ -0.27e-12■□□□□ 8
GTF3C1-203ENST00000562609 VN1R5Q7Z5H4 357 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 KCTD20Q7Z5Y7 419 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 NRARPQ7Z6K4 114 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 OR10T2Q8NGX3 314 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 NEDD4LQ96PU5 975 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 GON7Q9BXV9 100 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 BEX2Q9BXY8 128 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 EIF2B3Q9NR50 452 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ZMAT5Q9UDW3 170 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 GIMAP2Q9UG22 337 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ATF4P18848 351 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TM4SF4P48230 202 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 PGFP49763 221 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TRIP4Q15650 581 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 FAM83EQ2M2I3 478 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ESCO2Q56NI9 601 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 RAP1GAP2Q684P5 730 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 GLYATQ6IB77 296 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TCAIMQ8N3R3 496 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 DNAAF3Q8N9W5 541 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 NT5C3BQ969T7 300 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 C3orf30Q96M34 536 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 FEM1AQ9BSK4 669 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ZFP14Q9HCL3 533 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 CHST12Q9NRB3 414 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 SHROOM3Q8TF72 1996 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF780AO75290 641 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 MED26O95402 600 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 IL7P13232 177 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ADRA1BP35368 520 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 MTHFRP42898 656 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 MASP1P48740 699 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 PLK1P53350 603 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 IL5RAQ01344 420 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 GPR50Q13585 617 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 FAM122CQ6P4D5 195 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 CYHR1Q6ZMK1 362 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ZC3HC1Q86WB0 502 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 PTRH1Q86Y79 214 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ABI1Q8IZP0 508 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 KCTD13Q8WZ19 329 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TMEM74Q96NL1 305 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 GPR78Q96P69 363 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 ROGDIQ9GZN7 287 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 EML4Q9HC35 981 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 POLR3BQ9NW08 1133 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 AASSQ9UDR5 926 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 TEKT2Q9UIF3 430 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 VANGL2Q9ULK5 521 aa13.8□□□□□ -0.2
GTF3C1-203ENST00000562609 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 LOC100130705A0A1B0GUX0 176 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PCP4L1A6NKN8 68 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 UBXN8O00124 270 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PRMT5O14744 637 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 CAPN5O15484 640 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PGLSO95336 258 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ANGPTL1O95841 491 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ERCC2P18074 760 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 TSPAN8P19075 237 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 HRH2P25021 359 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 FMO3P31513 532 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SCNN1AP37088 669 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 NR2C2P49116 596 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 CSRP3P50461 194 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 EPS8Q12929 822 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SLAMF1Q13291 335 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 STARD3Q14849 445 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 LRRC26Q2I0M4 334 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PRRG3Q9BZD7 231 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SIK2Q9H0K1 926 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 MUC13Q9H3R2 512 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 DIABLOQ9NR28 239 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 VPS4AQ9UN37 437 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 HCN4Q9Y3Q4 1203 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 OR5K3A6NET4 321 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 HHLA1C9JL84 531 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 EPN2O95208 641 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ATP4BP51164 291 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PRKCDQ05655 676 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 NFYCQ13952 458 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 PARP15Q460N3 678 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 TOR2AQ5JU69 321 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SDHAF4Q5VUM1 108 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF470Q6ECI4 717 aa13.79□□□□□ -0.2
GTF3C1-203ENST00000562609 SPNS2Q8IVW8 549 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms