RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KDM3BQ7LBC6 1761 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 TTC3P53804 2025 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 RFX7Q2KHR2 1363 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 A0A1B0GVT2 93 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 CPED1A4D0V7 1026 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 OR2A25A4D2G3 310 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 KBTBD13C9JR72 458 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 SH2B2O14492 632 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 ERAL1O75616 437 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 OAZ2O95190 189 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 DNTTP04053 509 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 TPOP07202 933 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 ABCB1P08183 1280 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 UQCRFS1P1P0C7P4 283 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 SNHG28P0DPA3 235 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 GJA1P17302 382 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 CYP2B6P20813 491 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 RFX5P48382 616 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 HSD17B4P51659 736 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 CLCNKAP51800 687 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 HMGCS2P54868 508 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 FOXG1P55316 489 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 BAATQ14032 418 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 GRB14Q14449 540 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 HNF4GQ14541 408 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PCLAFQ15004 111 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PSMD6Q15008 389 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PLCB4Q15147 1175 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 RASA2Q15283 850 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 CALCRLQ16602 461 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 ATP13A5Q4VNC0 1218 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 GARNL3Q5VVW2 1013 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 KRT79Q5XKE5 535 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 ANKRD54Q6NXT1 300 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 DUS1LQ6P1R4 473 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 C8orf82Q6P1X6 216 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 CCNI2Q6ZMN8 369 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 ANKRD33Q7Z3H0 272 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 GPR180Q86V85 440 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 FJX1Q86VR8 437 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 HJURPQ8NCD3 748 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 PPP4R1Q8TF05 950 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 APBB2Q92870 758 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 SLC22A18Q96BI1 424 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 CNDP2Q96KP4 475 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 CEP295NLQ96MC4 621 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PUS3Q9BZE2 481 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 RTN4RQ9BZR6 473 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PIGMQ9H3S5 423 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 RABEP2Q9H5N1 569 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 BICC1Q9H694 974 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 DNAJC18Q9H819 358 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 ACSL5Q9ULC5 683 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 PTRH2Q9Y3E5 179 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 LOXL2Q9Y4K0 774 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 MAGED1Q9Y5V3 778 aaPredicted RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 FAM169AQ9Y6X4 670 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.68□□□□□ -1.82
HERC1-215ENST00000561436 MROH7Q68CQ1 1323 aa3.68□□□□□ -1.82
HERC1-215ENST00000561436 DDX60Q8IY21 1712 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 hCG_1809904A0A1W2PP81 198 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 A0A1W2PPE2 198 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 A0A1W2PR64 198 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 hDV102S1A0JD36 115 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 FAM90A10PA6NDY2 464 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 INAFM1C9JVW0 142 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERC1-215ENST00000561436 SLC25A27O95847 323 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 GLUD1P00367 558 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 GH2P01242 217 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 ICAM1P05362 532 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 CYBAP13498 195 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 SELLP14151 372 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 IL11P20809 199 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 ACADLP28330 430 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 EEF1DP29692 281 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 BTDP43251 543 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 CAPZA2P47755 286 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 GLUD2P49448 558 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 HNRNPH2P55795 449 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 NANOS2P60321 138 aaKnown RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 CDC16Q13042 620 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 PPIGQ13427 754 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERC1-215ENST00000561436 SHHQ15465 462 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 ALDH1L2Q3SY69 923 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 HIST2H2BCQ6DN03 193 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 HIST2H2BDQ6DRA6 164 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 TATDN1Q6P1N9 297 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 BHLHA9Q7RTU4 235 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 ATG9AQ7Z3C6 839 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 KBTBD6Q86V97 674 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 SAMD14Q8IZD0 417 aaPredicted RBP3.67□□□□□ -1.82
HERC1-215ENST00000561436 MINDY1Q8N5J2 469 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 IL17RCQ8NAC3 791 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 POGLUT1Q8NBL1 392 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 HM13Q8TCT9 377 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 WFIKKN2Q8TEU8 576 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 WASF1Q92558 559 aa3.67□□□□□ -1.82
HERC1-215ENST00000561436 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms