RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OR6C74A6NCV1 312 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 A8MU76 341 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 C2orf74A8MZ97 194 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 PPM1DO15297 605 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 NIPSNAP2O75323 286 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CSO75390 466 aaKnown RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 C8GP07360 202 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 MPC1LP0DKB6 136 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CDH3P22223 829 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CNTFP26441 200 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CRABP2P29373 138 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 ATP5DP30049 168 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SLC19A1P41440 591 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TRA2AQ13595 282 aaKnown RBP eCLIP10.45□□□□□ -0.74
TPM1-229ENST00000561242 SEMA3AQ14563 771 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CLCA4Q14CN2 919 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 FASTKD3Q14CZ7 662 aaKnown RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 KBTBD12Q3ZCT8 623 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TMEM71Q6P5X7 295 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 ZDHHC24Q6UX98 284 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 FAM83HQ6ZRV2 1179 aaPredicted RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 NEK10Q6ZWH5 1172 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SPRED1Q7Z699 444 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 IGDCC3Q8IVU1 814 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 CNTN4Q8IWV2 1026 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SLC22A15Q8IZD6 547 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TBC1D19Q8N5T2 526 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SIDT2Q8NBJ9 832 aaKnown RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 NAT14Q8WUY8 206 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 PATE1Q8WXA2 126 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 ATL1Q8WXF7 558 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TGM7Q96PF1 710 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 RUFY1Q96T51 708 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 NDNQ99608 321 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 GPR21Q99679 349 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TRIM56Q9BRZ2 755 aaKnown RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 P2RY12Q9H244 342 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 KIR3DX1Q9H7L2 352 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 PPCSQ9HAB8 311 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 LRRC4CQ9HCJ2 640 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 GPAMQ9HCL2 828 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SLC40A1Q9NP59 571 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 ARGLU1Q9NWB6 273 aaPredicted RBP10.45□□□□□ -0.74
TPM1-229ENST00000561242 SOHLH2Q9NX45 425 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 MOCS1Q9NZB8 636 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 PCDHB11Q9Y5F2 797 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 ENTPD2Q9Y5L3 495 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 MUC6Q6W4X9 2439 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SDK1Q7Z5N4 2213 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 PLXND1Q9Y4D7 1925 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 SLC5A10A0PJK1 596 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 PIPSLA2A3N6 862 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 CCNDBP1O95273 360 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 ARNTP27540 789 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 TYK2P29597 1187 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 PDHA2P29803 388 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 RPA3P35244 121 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 TARDBPQ13148 414 aaKnown RBP eCLIP10.44□□□□□ -0.74
TPM1-229ENST00000561242 GPR18Q14330 331 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 NUMA1Q14980 2115 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 PERM1Q5SV97 790 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 CACHD1Q5VU97 1274 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 KCTD16Q68DU8 428 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 CAPRIN2Q6IMN6 1127 aaKnown RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 TRMT10BQ6PF06 316 aaKnown RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 FBXO38Q6PIJ6 1188 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 WDR74Q6RFH5 385 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 NAPRTQ6XQN6 538 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 UBE2R2Q712K3 238 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 C11orf96Q7Z7L8 435 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 SLCO6A1Q86UG4 719 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 ZNF761Q86XN6 746 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 FAM129CQ86XR2 697 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 RELL1Q8IUW5 271 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 SYTL1Q8IYJ3 562 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 FBXO39Q8N4B4 442 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 AGBL5Q8NDL9 886 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 OR4D9Q8NGE8 314 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 OR5K2Q8NHB8 316 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 WDR36Q8NI36 951 aaKnown RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 BAHD1Q8TBE0 780 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 NXPE2Q96DL1 559 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 LINGO1Q96FE5 620 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 CD180Q99467 661 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 EGFL8Q99944 293 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 CDC42EP4Q9H3Q1 356 aaKnown RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 ZNF624Q9P2J8 865 aaPredicted RBP10.44□□□□□ -0.74
TPM1-229ENST00000561242 CTNNAL1Q9UBT7 734 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 SLC24A2Q9UI40 661 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 WDR37Q9Y2I8 494 aa10.44□□□□□ -0.74
TPM1-229ENST00000561242 IGHV1OR21-1A0A087WYE8 117 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 CCDC187A0A096LP49 1063 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 GOLGA6L10A6NI86 522 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 SLC16A5O15375 505 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 CAPN5O15484 640 aaPredicted RBP10.43□□□□□ -0.74
TPM1-229ENST00000561242 HYAL3O43820 417 aaPredicted RBP10.43□□□□□ -0.74
TPM1-229ENST00000561242 SLCO2B1O94956 709 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 GIMD1P0DJR0 217 aa10.43□□□□□ -0.74
TPM1-229ENST00000561242 POLR2CP19387 275 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms