RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 EEFSECP57772 596 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 DPY19L1Q2PZI1 675 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ADPRMQ3LIE5 342 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 AGAP6Q5VW22 663 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ERAP2Q6P179 960 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 RFPL4BQ6ZWI9 263 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CUZD1Q86UP6 607 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 P2RY8Q86VZ1 359 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 CILP2Q8IUL8 1156 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 POC5Q8NA72 575 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 TXNDC5Q8NBS9 432 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 NDNFQ8TB73 568 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 YIPF6Q96EC8 236 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 AGAP4Q96P64 663 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF300Q96RE9 604 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 EPS8L2Q9H6S3 715 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 A3GALT2U3KPV4 340 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 PMF1-BGLAPU3KQ54 211 aa13.74□□□□□ -0.21
RABGGTA-220ENST00000560998 SCN5AQ14524 2016 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 F5H5T6 163 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 NR5A2O00482 541 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 ADAM12O43184 909 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 LDB2O43679 373 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC6A4P31645 630 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 P2RX3P56373 397 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 IL18R1Q13478 541 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 FXNQ16595 210 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 PPP1R3AQ16821 1122 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 GEN1Q17RS7 908 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 CFAP52Q8N1V2 620 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 RORBQ92753 470 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 SDCCAG3Q96C92 435 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 RMDN1Q96DB5 314 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 KCTD14Q9BQ13 255 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 CLPBQ9H078 707 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 MMP27Q9H306 513 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 ALG2Q9H553 416 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 TM9SF3Q9HD45 589 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 BRCA2P51587 3418 aa13.73□□□□□ -0.21
RABGGTA-220ENST00000560998 A6NL46 340 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM25AB3EWG3 89 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM25CB3EWG5 89 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM25GB3EWG6 89 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 CCL22O00626 93 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ACSL4O60488 711 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 INMTO95050 263 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FKBP9O95302 570 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 UBL4AP11441 157 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 IL7RP16871 459 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ACVR2AP27037 513 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 CSHL1Q14406 222 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF235Q14590 738 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC14A2Q15849 920 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 TECRLQ5HYJ1 363 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 HECTD2Q5U5R9 776 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 MIER2Q8N344 545 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PJA1Q8NG27 643 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 OR9I1Q8NGQ6 314 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 OR6P1Q8NGX9 317 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAR1Q8WVX9 515 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PROX1Q92786 737 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 TMEM125Q96AQ2 219 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 SLIRPQ9GZT3 109 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 DIABLOQ9NR28 239 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ABCB10Q9NRK6 738 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 DNMT3LQ9UJW3 386 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ICMTO60725 284 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 MRPS14O60783 128 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 S1PR4O95977 384 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 HLA-DPA1P20036 260 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 GSK3BP49841 420 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 DEFA1P59665 94 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 DEFA3P59666 94 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ZNF45Q02386 682 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 ACVR1Q04771 509 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FADDQ13158 208 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM83EQ2M2I3 478 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 KIF19Q2TAC6 998 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAAH2Q6GMR7 532 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 TBPL2Q6SJ96 375 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC22A9Q8IVM8 553 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 RIMKLAQ8IXN7 391 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PNPLA1Q8N8W4 532 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms