RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 NELFEP18615 380 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 CHRM3P20309 590 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MAP4P27816 1152 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 ITPKBP27987 946 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 NMBRP28336 390 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PDHA2P29803 388 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CASQ1P31415 396 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SHMT2P34897 504 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CA5AP35218 305 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MAGEA6P43360 314 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PREPP48147 710 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 LEPRP48357 1165 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 SEPHS1P49903 392 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 EMP3P54852 163 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ADARP55265 1226 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 GFERP55789 205 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 CXADRP78310 365 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 HSD11B2P80365 405 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MC2RQ01718 297 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ACY1Q03154 408 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CFHR1Q03591 330 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 VAC14Q08AM6 782 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PRKG2Q13237 762 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TUBB3Q13509 450 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 THOC5Q13769 683 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 KCNJ11Q14654 390 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 LONRF1Q17RB8 773 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TTLL9Q3SXZ7 439 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MANEAQ5SRI9 462 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ANKS6Q68DC2 871 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 KIAA0930Q6ICG6 404 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 CAPRIN2Q6IMN6 1127 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 NEPROQ6NW34 567 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TTC27Q6P3X3 843 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 GPR155Q7Z3F1 870 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MAATS1Q7Z4T9 603 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PRSS42Q7Z5A4 293 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TMEM135Q86UB9 458 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PDZD3Q86UT5 571 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PPP1R3BQ86XI6 285 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CILP2Q8IUL8 1156 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 RASGRP3Q8IV61 690 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 KLHL7Q8IXQ5 586 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 LMNTD2Q8IXW0 634 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 NLGN4XQ8N0W4 816 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PDIK1LQ8N165 341 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ESX1Q8N693 406 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SIDT2Q8NBJ9 832 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 BBOF1Q8ND07 529 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 NLGN4YQ8NFZ3 816 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR5K2Q8NHB8 316 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 MAGEC3Q8TD91 643 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 NAT14Q8WUY8 206 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CPT1BQ92523 772 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 N4BP2L2Q92802 583 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 ZDHHC16Q969W1 377 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SLC22A18Q96BI1 424 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 FOPNLQ96NB1 174 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SERPINB12Q96P63 405 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR6C1Q96RD1 312 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 INSM2Q96T92 566 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 FAM167BQ9BTA0 163 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 NAT9Q9BTE0 207 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 EFHD1Q9BUP0 239 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 CARD6Q9BX69 1037 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 DDX47Q9H0S4 455 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR52A5Q9H2C5 316 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 TFB2MQ9H5Q4 396 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 PPANQ9NQ55 473 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 C20orf96Q9NUD7 363 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 INTS10Q9NVR2 710 aaKnown RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SOHLH2Q9NX45 425 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SYBUQ9NX95 663 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 OR6C2Q9NZP2 312 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 SLC24A2Q9UI40 661 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PCDHGA10Q9Y5H3 936 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 B3GALT1Q9Y5Z6 326 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 RPS6KL1Q9Y6S9 549 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 ARHGEF17Q96PE2 2063 aaPredicted RBP4.26□□□□□ -1.73
SNX1-205ENST00000559339 PKD1L2Q7Z442 2459 aa4.26□□□□□ -1.73
SNX1-205ENST00000559339 PTPRBP23467 1997 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PLXNB3Q9ULL4 1909 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ZFHX4Q86UP3 3567 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 IGHV5-51A0A0C4DH38 117 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TCRBV7S3A2A0A539 114 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PIPSLA2A3N6 862 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 IQCF5A8MTL0 148 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 GOLGA8KD6RF30 607 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 GOLGA8TH3BQL2 631 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 K7ENP7 123 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ERVH48-1M5A8F1 160 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 DNALI1O14645 258 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 STK17BO94768 372 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 USP1O94782 785 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TMEM63AO94886 807 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SLCO2B1O94956 709 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 231.6 ms