RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ZNF260Q3ZCT1 412 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PHLDA2Q53GA4 152 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TCTE1Q5JU00 501 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 GCNT6Q5T4J0 391 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FAM91A1Q658Y4 838 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 OR7E24Q6IFN5 339 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 C8orf82Q6P1X6 216 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 FAM198BQ6UWH4 519 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TMEM182Q6ZP80 229 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 ASB18Q6ZVZ8 466 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ARHGAP22Q7Z5H3 698 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ABI3BPQ7Z7G0 1075 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TLK2Q86UE8 772 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PIM3Q86V86 326 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ZDHHC17Q8IUH5 632 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MFN1Q8IWA4 741 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ADHFE1Q8IWW8 467 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SYCP3Q8IZU3 236 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ARHGAP24Q8N264 748 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 CLIP4Q8N3C7 705 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 UXS1Q8NBZ7 420 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MOSPD2Q8NHP6 518 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 THAP6Q8TBB0 222 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MGARPQ8TDB4 240 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 PPP4R1Q8TF05 950 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ROBO4Q8WZ75 1007 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FIG4Q92562 907 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 NSMAFQ92636 917 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 DAZLQ92904 295 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 EXT2Q93063 718 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PTP4A1Q93096 173 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SNX21Q969T3 373 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MIB2Q96AX9 1013 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ARSGQ96EG1 525 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 STAMBPL1Q96FJ0 436 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TMEM19Q96HH6 336 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FAM84BQ96KN1 310 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 SPATA33Q96N06 139 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SFXN2Q96NB2 322 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 OR1F2PQ96R84 312 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SLX1AQ9BQ83 275 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FERMT1Q9BQL6 677 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SF3B5Q9BWJ5 86 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 MOV10L1Q9BXT6 1211 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 WNT5BQ9H1J7 359 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 IL25Q9H293 177 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MMADHCQ9H3L0 296 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 COPS7BQ9H9Q2 264 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 PELI2Q9HAT8 420 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 DNAJC4Q9NNZ3 241 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PFDN4Q9NQP4 134 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TMEM30AQ9NV96 361 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 DDX43Q9NXZ2 648 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 PTTG2Q9NZH5 202 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ZNF224Q9NZL3 707 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MDFICQ9P1T7 246 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 WNT16Q9UBV4 365 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MALT1Q9UDY8 824 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 POLLQ9UGP5 575 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SIX4Q9UIU6 781 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ABT1Q9ULW3 272 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 AMDHD2Q9Y303 409 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TMED3Q9Y3Q3 217 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.57□□□□□ -2.16
USP3-209ENST00000558925 SNX5Q9Y5X3 404 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 IGSF1Q8N6C5 1336 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 HEG1Q9ULI3 1381 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 WDR81Q562E7 1941 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 NOTCH4Q99466 2003 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ZCWPW2A0A1B0GU75 182 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SMIM30A4D0T7 59 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CLEC18AA5D8T8 446 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ASPDHA6ND91 283 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GOLGA6L9A6NEM1 432 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TRIM64A6NGJ6 449 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 TRIM64BA6NI03 449 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SMTNL1A8MU46 457 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CLDN4O14493 209 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ZNHIT1O43257 154 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GPR137BO60478 399 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 SELENOFO60613 162 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 WDR1O75083 606 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 BMP10O95393 424 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 WDPCPO95876 746 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 LIPFP07098 398 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CSN3P07498 182 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 HSP90AB1P08238 724 aaKnown RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 FAM106CPP0CH98 169 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 HAPLN1P10915 354 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 GNAZP19086 355 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 CD27P26842 260 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 PSMB4P28070 264 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ATP5DP30049 168 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GNL1P36915 607 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 WNT5AP41221 380 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 GMPSP49915 693 aaPredicted RBP1.56□□□□□ -2.16
USP3-209ENST00000558925 ZNF75DP51815 510 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 THOP1P52888 689 aa1.56□□□□□ -2.16
USP3-209ENST00000558925 ADARP55265 1226 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms