RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 AARS2Q5JTZ9 985 aaKnown RBP14.89□□□□□ -0.03
RPL28-207ENST00000558815 CASC4Q6P4E1 433 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
RPL28-207ENST00000558815 UNC5BQ8IZJ1 945 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 KRT222Q8N1A0 295 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 OR52E1Q8NGJ3 308 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 OR5AR1Q8NGP9 310 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 LKAAEAR1Q8TD35 194 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 PEX13Q92968 403 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 PPM1MQ96MI6 270 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 ZPBPQ9BS86 351 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 ULBP3Q9BZM4 244 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 XKR8Q9H6D3 395 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 TREX1Q9NSU2 369 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 SOHLH2Q9NX45 425 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 PILRAQ9UKJ1 303 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 SNX12Q9UMY4 172 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 ASF1AQ9Y294 204 aa14.89□□□□□ -0.03
RPL28-207ENST00000558815 TDRKHQ9Y2W6 561 aaKnown RBP14.89□□□□□ -0.03
RPL28-207ENST00000558815 GOLGA8KD6RF30 607 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 ERVH48-1M5A8F1 160 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 NDUFS3O75489 264 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 TMEM63AO94886 807 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 NELFEP18615 380 aaKnown RBP14.88□□□□□ -0.03
RPL28-207ENST00000558815 CDH3P22223 829 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 KPNA2P52292 529 aaKnown RBP14.88□□□□□ -0.03
RPL28-207ENST00000558815 CDK16Q00536 496 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 TUBB3Q13509 450 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 CYP1B1Q16678 543 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
RPL28-207ENST00000558815 MPP5Q8N3R9 675 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 ACTRT1Q8TDG2 376 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 SNRNP27Q8WVK2 155 aaKnown RBP14.88□□□□□ -0.03
RPL28-207ENST00000558815 MFSD3Q96ES6 412 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 CD180Q99467 661 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 TSSK1BQ9BXA7 367 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 MVB12BQ9H7P6 319 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 LNPEPQ9UIQ6 1025 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 CACNA1GO43497 2377 aa14.88□□□□□ -0.03
RPL28-207ENST00000558815 AHCTF1Q8WYP5 2266 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 IGSF10Q6WRI0 2623 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 LOC101059948A0A1B0GTJ6 334 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 SLC5A10A0PJK1 596 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 BTN3A3O00478 584 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 BTN3A1O00481 513 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 KIAA0754O94854 1291 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 VAPBO95292 243 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 FOLR1P15328 257 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 CCR7P32248 378 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TTPAP49638 278 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 GNG11P61952 73 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 HSPA14Q0VDF9 509 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 LY6DQ14210 128 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 IL11RAQ14626 422 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 PCSK4Q6UW60 755 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 PPP1R3BQ86XI6 285 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 GALNT6Q8NCL4 622 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 CFAP61Q8NHU2 1237 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 CPT1BQ92523 772 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TTC9Q92623 222 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 KIAA1143Q96AT1 154 aaPredicted RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 SLC41A2Q96JW4 573 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 CAPZA3Q96KX2 299 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TRIM56Q9BRZ2 755 aaKnown RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 KIFC1Q9BW19 673 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 KLHL25Q9H0H3 589 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TRIT1Q9H3H1 467 aaKnown RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 GPN2Q9H9Y4 310 aaPredicted RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 PDE7BQ9NP56 450 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 SAMD15Q9P1V8 674 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TSR3Q9UJK0 312 aaKnown RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 RARRES3Q9UL19 164 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 PLAGL1Q9UM63 463 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 SOX13Q9UN79 622 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 TMEM184BQ9Y519 407 aaPredicted RBP14.87□□□□□ -0.03
RPL28-207ENST00000558815 MGAQ8IWI9 3026 aa14.87□□□□□ -0.03
RPL28-207ENST00000558815 PRMT5O14744 637 aaPredicted RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 SPAG6O75602 509 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 DLGAP3O95886 979 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 MAP4P27816 1152 aaKnown RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 EIF3BP55884 814 aaKnown RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 HSD11B2P80365 405 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 ACY1Q03154 408 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 PPP1R7Q15435 360 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 GPR19Q15760 415 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 CYB5D1Q6P9G0 228 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 CAND1Q86VP6 1230 aaKnown RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 AMIGO1Q86WK6 493 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 VRK3Q8IV63 474 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 GRK7Q8WTQ7 553 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 EXTL1Q92935 676 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 ZNF669Q96BR6 464 aaPredicted RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 STAMBPL1Q96FJ0 436 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 SGSM3Q96HU1 749 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 ARHGAP9Q9BRR9 750 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 SPRY4Q9C004 299 aa14.86□□□□□ -0.03
RPL28-207ENST00000558815 DDX47Q9H0S4 455 aaKnown RBP14.86□□□□□ -0.03
RPL28-207ENST00000558815 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms