RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ULK2Q8IYT8 1036 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 DCBLD1Q8N8Z6 715 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 OR56A4Q8NGH8 313 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
SMAD3-207ENST00000558763 HDAC8Q9BY41 377 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 POLG2Q9UHN1 485 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 BAIAP2L1Q9UHR4 511 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 PDE10AQ9Y233 779 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 BTRCQ9Y297 605 aa12.69□□□□□ -0.38
SMAD3-207ENST00000558763 OR2AG2A6NM03 316 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 UBDO15205 165 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 ENTPD5O75356 428 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 OR4F21O95013 312 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 GUCA1CO95843 209 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 PDGFBP01127 241 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 VCLP18206 1134 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 HSPA7P48741 367 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 PRLHRP49683 370 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 MNAT1P51948 309 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 HSPA14Q0VDF9 509 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 FZD5Q13467 585 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 GAS6Q14393 721 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 GRB7Q14451 532 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 TCHHL1Q5QJ38 904 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 WASHC2DQ5SRD0 308 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 PLEKHS1Q5SXH7 462 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 PGM2L1Q6PCE3 622 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 TMEM92Q6UXU6 159 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 GPRIN3Q6ZVF9 776 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 NLRP8Q86W28 1048 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 MCUR1Q96AQ8 359 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 CDK15Q96Q40 435 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 MKRN2Q9H000 416 aaKnown RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 RSPH9Q9H1X1 276 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 NOL11Q9H8H0 719 aaKnown RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 SLC7A8Q9UHI5 535 aa12.68□□□□□ -0.38
SMAD3-207ENST00000558763 TNPO3Q9Y5L0 923 aaKnown RBP12.68□□□□□ -0.38
SMAD3-207ENST00000558763 NUMA1Q14980 2115 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 C1QTNF3-AMACRE9PGA6 284 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 GFYI3L273 518 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 TSPAN6O43657 245 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 MMP20O60882 483 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 LILRB5O75023 590 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 MPC1LP0DKB6 136 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 UROSP10746 265 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 EPORP19235 508 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 MSH3P20585 1137 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 GDF5P43026 501 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 PKNOX1P55347 436 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 TAS2R38P59533 333 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 DPTQ07507 201 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 GTF2H2Q13888 395 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 BOP1Q14137 746 aaKnown RBP12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SQLEQ14534 574 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 LDLRAP1Q5SW96 308 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SULT1C3Q6IMI6 304 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 GTF2H2CQ6P1K8 395 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 AADATQ8N5Z0 425 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 LILRA3Q8N6C8 439 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SNX31Q8N9S9 440 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 OR2T11Q8NH01 316 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 PPP1R16AQ96I34 528 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 NELL2Q99435 816 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 THTPAQ9BU02 230 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SLC12A9Q9BXP2 914 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 FADS3Q9Y5Q0 445 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 INPP4BO15327 924 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 MID1O15344 667 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 RNASEH1O60930 286 aaKnown RBP12.67□□□□□ -0.38
SMAD3-207ENST00000558763 DCNP07585 359 aaKnown RBP12.67□□□□□ -0.38
SMAD3-207ENST00000558763 LINC00032P0C843 101 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 THRAP10827 490 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 HTR6P50406 440 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 ATP4BP51164 291 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CDKL1Q00532 357 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CDC16Q13042 620 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CUL3Q13618 768 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CST6Q15828 149 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 RBBP7Q16576 425 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 CDKL4Q5MAI5 379 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 AGBL4Q5VU57 503 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 GK5Q6ZS86 529 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 NEK10Q6ZWH5 1172 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 SCUBE1Q8IWY4 988 aa12.67□□□□□ -0.38
SMAD3-207ENST00000558763 EDAQ92838 391 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms