RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MCOLN3Q8TDD5 553 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 CKAP2Q8WWK9 683 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
VPS18-202ENST00000558474 LOXL4Q96JB6 756 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 MAGEB18Q96M61 343 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 PRRX2Q99811 253 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 PAIP2Q9BPZ3 127 aaKnown RBP14.55□□□□□ -0.08
VPS18-202ENST00000558474 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 GSDMCQ9BYG8 508 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 C11orf16Q9NQ32 467 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 TM7SF3Q9NS93 570 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 OXSMQ9NWU1 459 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 CPSF2Q9P2I0 782 aaKnown RBP14.55□□□□□ -0.08
VPS18-202ENST00000558474 PRKAB1Q9Y478 270 aa14.55□□□□□ -0.08
VPS18-202ENST00000558474 ABCA7Q8IZY2 2146 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 STX16-NPEPL1H3BU86 382 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 STX16O14662 325 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 TRIM13O60858 407 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 IPO13O94829 963 aaKnown RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 S100BP04271 92 aaPredicted RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 SLC35G4P0C7Q5 338 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 CTSEP14091 401 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 SLC2A4P14672 509 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 ITPKAP23677 461 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 GRK2P25098 689 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 MAP4P27816 1152 aaKnown RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 PDHA2P29803 388 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 SERPINB5P36952 375 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 PREPP48147 710 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 HNMTP50135 292 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 CTBSQ01459 385 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 SIM2Q14190 667 aaPredicted RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 TGFBIQ15582 683 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 ZC3H14Q6PJT7 736 aaKnown RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 ABRAXAS1Q6UWZ7 409 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 ARMCX6Q7L4S7 300 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 PHACTR4Q8IZ21 702 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 PDPRQ8NCN5 879 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 PHC3Q8NDX5 983 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 SKA2Q8WVK7 121 aaPredicted RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 C12orf65Q9H3J6 166 aaKnown RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 DNAJC16Q9Y2G8 782 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 HEBP2Q9Y5Z4 205 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 SLCO1B1Q9Y6L6 691 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 TP53BP1Q12888 1972 aaPredicted RBP14.54□□□□□ -0.08
VPS18-202ENST00000558474 FANCMQ8IYD8 2048 aa14.54□□□□□ -0.08
VPS18-202ENST00000558474 OR5K4A6NMS3 321 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 SRRM3A6NNA2 597 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 FFAR2O15552 330 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 DFNA5O60443 496 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 DLX3O60479 287 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 SNX2O60749 519 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 ANXA5P08758 320 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 MTHFD2P13995 350 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 JUNDP17535 347 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 NDUFS1P28331 727 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 ALDH3A1P30838 453 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 HALP42357 657 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 KCNC1P48547 511 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 RPIAP49247 311 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 ALDH18A1P54886 795 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 HNRNPKP61978 463 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS18-202ENST00000558474 SRSF5Q13243 272 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 ELOCQ15369 112 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 UAP1L1Q3KQV9 507 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 ATG16L1Q676U5 607 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 SULT1C3Q6IMI6 304 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 RAB44Q7Z6P3 723 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 LILRA3Q8N6C8 439 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 ATL1Q8WXF7 558 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 TFGQ92734 400 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 CCDC138Q96M89 665 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 C1QTNF3Q9BXJ4 246 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 COL25A1Q9BXS0 654 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 CAPS2Q9BXY5 557 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 UNKQ9C0B0 810 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 ZDHHC5Q9C0B5 715 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 TMEM168Q9H0V1 697 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 APOBEC3BQ9UH17 382 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 ADAMTS6Q9UKP5 1117 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 PNMA8BQ9ULN7 279 aaPredicted RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 PDE10AQ9Y233 779 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 KCNK6Q9Y257 313 aa14.53□□□□□ -0.08
VPS18-202ENST00000558474 TNPO3Q9Y5L0 923 aaKnown RBP14.53□□□□□ -0.08
VPS18-202ENST00000558474 SPAG17Q6Q759 2223 aa14.52□□□□□ -0.08
VPS18-202ENST00000558474 A8MT66 165 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 SUPT3HB4E1H0 165 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 KDM1AO60341 852 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 SUPT3HO75486 399 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 C1orf105O95561 183 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 NEFHP12036 1026 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 GFAPP14136 432 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 IMPDH1P20839 514 aa14.52□□□□□ -0.09
VPS18-202ENST00000558474 CTSKP43235 329 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms