RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 SPG21Q9NZD8 308 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CRNNQ9UBG3 495 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 C19orf25Q9UFG5 118 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ODF2LQ9ULJ1 636 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ERVK-19Q9WJR5 959 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PTRH2Q9Y3E5 179 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RAI2Q9Y5P3 530 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 BIRC6Q9NR09 4857 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PTPRCP08575 1304 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SALL3Q9BXA9 1300 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 WIZO95785 1651 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 OTOGQ6ZRI0 2925 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 LOC285556D6RIA3 1793 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HERC2O95714 4834 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A1W2PPW3 197 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A1W2PQF6 199 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SLC22A23A1A5C7 686 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 EME2A4GXA9 379 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM90A8PA6NJQ4 464 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NPIPA3F8WFD2 350 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SCO2O43819 266 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DIAPH2O60879 1101 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 HSF2BPO75031 334 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MFN2O95140 757 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 BAG3O95817 575 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SFTPBP07988 381 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PDHA1P08559 390 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MMP10P09238 476 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM90A13PP0C7W8 464 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM90A24PP0C7X0 464 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PLA2G4BP0C869 781 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGHV4-30-4P0DP06 118 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TGFB3P10600 412 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CYP2D6P10635 497 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 P4HA1P13674 534 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 FERP16591 822 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CCND2P30279 289 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DCTDP32321 178 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RFX2P48378 723 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CLDN2P57739 230 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PITX1P78337 314 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPARDQ03181 441 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZNF91Q05481 1191 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TROAPQ12815 778 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MYBPHQ13203 477 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GTF2H2Q13888 395 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 PPA1Q15181 289 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 LETM2Q2VYF4 491 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KCNT1Q5JUK3 1230 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 LRRC38Q5VT99 294 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 KIAA0930Q6ICG6 404 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GTF2H2CQ6P1K8 395 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ARL10Q8N8L6 244 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR6J1Q8NGC5 347 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SPATA20Q8TB22 786 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM255BQ8WV15 326 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 LARP4BQ92615 738 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RPL36ALQ969Q0 106 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DHX58Q96C10 678 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ZG16BQ96DA0 208 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 OR6C1Q96RD1 312 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 SSX3Q99909 188 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM204Q9BSN7 226 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 NYXQ9GZU5 481 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ABCG8Q9H221 673 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 IKZF4Q9H2S9 585 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CXorf56Q9H5V9 222 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 DNAJC18Q9H819 358 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 C10orf88Q9H8K7 445 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 ASB6Q9NWX5 421 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MIS18AQ9NYP9 233 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 WSB2Q9NYS7 404 aaPredicted RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 CISD1Q9NZ45 108 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 TRIM10Q9UDY6 481 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 MKLN1Q9UL63 735 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 GRID1Q9ULK0 1009 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.32□□□□□ -2.24e-7■□□□□ 10.4
CTDSPL2-202ENST00000558373 SQORQ9Y6N5 450 aa1.32□□□□□ -2.2
CTDSPL2-202ENST00000558373 RNF123Q5XPI4 1314 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 NRXN2Q9P2S2 1712 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 TMEM94Q12767 1356 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 IGLV5-37A0A075B6J1 123 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 A0A0B4J203 849 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 FAM90A10PA6NDY2 464 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 NEMP2A6NFY4 417 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 DDTLA6NHG4 134 aaPredicted RBP1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 HSPB2A8KAH6 182 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 VWC2LB2RUY7 222 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 VCYO14598 125 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 KRT86O43790 486 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 KLK8O60259 260 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 SNX3O60493 162 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 KCNJ13O60928 360 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 PRKRAO75569 313 aaKnown RBP1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 RFPL2O75678 378 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 GRAP2O75791 330 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 CH25HO95992 272 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 GAS8O95995 478 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 TUBBP07437 444 aa1.31□□□□□ -2.2
CTDSPL2-202ENST00000558373 IRF2P14316 349 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms