RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DEPDC7Q96QD5 511 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 RANBP9Q96S59 729 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 APOL2Q9BQE5 337 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 CCDC3Q9BQI4 270 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 KIFC1Q9BW19 673 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 TEX101Q9BY14 249 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 MRM3Q9HC36 420 aaKnown RBP10.14□□□□□ -0.79
TPM1-212ENST00000558347 CYP4F12Q9HCS2 524 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 FBXO6Q9NRD1 293 aaPredicted RBP10.14□□□□□ -0.79
TPM1-212ENST00000558347 PCMTD2Q9NV79 361 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 SYBUQ9NX95 663 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 TAS2R1Q9NYW7 299 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 GULP1Q9UBP9 304 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 TAGLN3Q9UI15 199 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 CORO1CQ9ULV4 474 aaPredicted RBP10.14□□□□□ -0.79
TPM1-212ENST00000558347 GPR34Q9UPC5 381 aa10.14□□□□□ -0.79
TPM1-212ENST00000558347 PRSS38A1L453 326 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 UGT1A9O60656 530 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 SOD1P00441 154 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 CEACAM5P06731 702 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 KELP23276 732 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 GRK2P25098 689 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 PGM1P36871 562 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 CHRNA4P43681 627 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 PTDSS1P48651 473 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 RPIAP49247 311 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 EPHB1P54762 984 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 RPL26P61254 145 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 CDK3Q00526 305 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 DPTQ07507 201 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 ISXQ2M1V0 245 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 PCID2Q5JVF3 399 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 SPANXN3Q5MJ09 141 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 CERCAMQ5T4B2 595 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 PACS1Q6VY07 963 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 RINLQ6ZS11 566 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 NET1Q7Z628 596 aaPredicted RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 TMEM135Q86UB9 458 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 WDR75Q8IWA0 830 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 SDR16C5Q8N3Y7 309 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 LPCAT1Q8NF37 534 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 SCG3Q8WXD2 468 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 STMN2Q93045 179 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 SCAMP4Q969E2 229 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 ISL2Q96A47 359 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 AGAP2Q99490 1192 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 NMUR2Q9GZQ4 415 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 ABCG8Q9H221 673 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 UGT1A7Q9HAW7 530 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 UGT1A10Q9HAW8 530 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 UGT1A8Q9HAW9 530 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 PHPT1Q9NRX4 125 aaPredicted RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 KCTD5Q9NXV2 234 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 STX18Q9P2W9 335 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 MOSPD1Q9UJG1 213 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 LHX6Q9UPM6 363 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 TCAF1Q9Y4C2 921 aa10.13□□□□□ -0.79
TPM1-212ENST00000558347 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
TPM1-212ENST00000558347 A0A087WV48 116 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 A0A1W2PNU3 283 aaPredicted RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 CAPN8A6NHC0 703 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 NOBOXO60393 691 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ENTPD5O75356 428 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SMNDC1O75940 238 aaKnown RBP eCLIP10.12□□□□□ -0.791e-8■■□□□ 11.9
TPM1-212ENST00000558347 USP1O94782 785 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 KLHL2O95198 593 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PSMG1O95456 288 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CLDN7O95471 211 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 SERPINE1P05121 402 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 MPOP05164 745 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 POLBP06746 335 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 ALOX15P16050 662 aaPredicted RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 ZNF30P17039 623 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 TPH1P17752 444 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 MAGEA12P43365 314 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 GPR1P46091 355 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 POLD2P49005 469 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 STC1P52823 247 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PDX1P52945 283 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CRADDP78560 199 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 MRPS35P82673 323 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 SLC34A1Q06495 639 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 LAMB3Q13751 1172 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 BMPR2Q13873 1038 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 COL28A1Q2UY09 1125 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 TRMT5Q32P41 509 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 GRTP1Q5TC63 336 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 C6orf163Q5TEZ5 329 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 MROH9Q5TGP6 573 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CASC4Q6P4E1 433 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 TAF8Q7Z7C8 310 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 NRROSQ86YC3 692 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PPHLN1Q8NEY8 458 aaKnown RBP10.12□□□□□ -0.79
TPM1-212ENST00000558347 GPR156Q8NFN8 814 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 DNAJC9Q8WXX5 260 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 PEX13Q92968 403 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 NAT6Q93015 286 aa10.12□□□□□ -0.79
TPM1-212ENST00000558347 CCDC74AQ96AQ1 378 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms