RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ARL4CP56559 192 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 PCBP4P57723 403 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 TMEM164Q5U3C3 297 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 HIBCHQ6NVY1 386 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 DUS1LQ6P1R4 473 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 LRRC69Q6ZNQ3 347 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 CLEC14AQ86T13 490 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 OOSP2Q86WS3 158 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 CILP2Q8IUL8 1156 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 RCBTB1Q8NDN9 531 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF248Q8NDW4 579 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 TFGQ92734 400 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 LRRC39Q96DD0 335 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 THAP11Q96EK4 314 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 EBNA1BP2Q99848 306 aaKnown RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 B3GNT4Q9C0J1 378 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 P2RY12Q9H244 342 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 C20orf96Q9NUD7 363 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-211ENST00000557623 SLC24A2Q9UI40 661 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 CDC23Q9UJX2 597 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 RAXQ9Y2V3 346 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 PCDHGA7Q9Y5G6 932 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
SLIRP-211ENST00000557623 ACACBO00763 2458 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 A8MU76 341 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 CAPN5O15484 640 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 KDM1AO60341 852 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 S1PR4O95977 384 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ESR1P03372 595 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 HGFP14210 728 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ITGB6P18564 788 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 CCR7P32248 378 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 MAPK10P53779 464 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 EIF3BP55884 814 aaKnown RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 C2orf54Q08AI8 447 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 BRD3Q15059 726 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 HIF1AQ16665 826 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF470Q6ECI4 717 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ARMC6Q6NXE6 501 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ZNF572Q7Z3I7 529 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 AGGF1Q8N302 714 aaeCLIP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 GSDMBQ8TAX9 411 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 LPGAT1Q92604 370 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 C9orf72Q96LT7 481 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 TGM7Q96PF1 710 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 CD180Q99467 661 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 TRIM31Q9BZY9 425 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 KLHL3Q9UH77 587 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 POLG2Q9UHN1 485 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ASF1AQ9Y294 204 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 MAP1BP46821 2468 aaKnown RBP12.17□□□□□ -0.46
SLIRP-211ENST00000557623 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
SLIRP-211ENST00000557623 TPRP12270 2363 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 A0A087WV48 116 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 PMS2P1A4D2B8 440 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 OR5K3A6NET4 321 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 IQCF5A8MTL0 148 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 B4E171 279 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 MATN2O00339 956 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 NVLO15381 856 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 GPC4O75487 556 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 RASSF9O75901 435 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 RPN2P04844 631 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 ITIH1P19827 911 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 AOAHP28039 575 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 ACADLP28330 430 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 FMO4P31512 558 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TSPAN7P41732 249 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
SLIRP-211ENST00000557623 GFERP55789 205 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 RAB15P59190 212 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 HSPA14Q0VDF9 509 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 CRYMQ14894 314 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 IRGCQ6NXR0 463 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 CENPUQ71F23 418 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 PRSS42Q7Z5A4 293 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 KCNMB4Q86W47 210 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
SLIRP-211ENST00000557623 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms