RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.26■■□□□ 1.15
TDP1-216ENST00000556867 ASZ1Q8WWH4 475 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 USP7Q93009 1102 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 C16orf45Q96MC5 204 aaPredicted RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 BIRC8Q96P09 236 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 EBNA1BP2Q99848 306 aaKnown RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 NAT9Q9BTE0 207 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 INTS10Q9NVR2 710 aaKnown RBP22.26■■□□□ 1.15
TDP1-216ENST00000556867 OCIAD1Q9NX40 245 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 CDYLQ9Y232 598 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 VPS9D1Q9Y2B5 631 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 PCDHGA3Q9Y5H0 932 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 FAM169AQ9Y6X4 670 aa22.26■■□□□ 1.15
TDP1-216ENST00000556867 FAM187AA6NFU0 413 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 EFCAB7A8K855 629 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 EFCAB8A8MWE9 144 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 C9orf172C9J069 976 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 PRAMEF10O60809 474 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 ESR1P03372 595 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 ITGA8P53708 1063 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 THOC5Q13769 683 aaKnown RBP22.25■■□□□ 1.15
TDP1-216ENST00000556867 TMED2Q15363 201 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 LRRC69Q6ZNQ3 347 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 ZNF572Q7Z3I7 529 aaPredicted RBP22.25■■□□□ 1.15
TDP1-216ENST00000556867 FAM129CQ86XR2 697 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 PDIK1LQ8N165 341 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 PHC3Q8NDX5 983 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 TAAR9Q96RI9 348 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 DDA1Q9BW61 102 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 TRIM31Q9BZY9 425 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 ZNF768Q9H5H4 540 aaKnown RBP22.25■■□□□ 1.15
TDP1-216ENST00000556867 C20orf96Q9NUD7 363 aaPredicted RBP22.25■■□□□ 1.15
TDP1-216ENST00000556867 SEMA5BQ9P283 1151 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 PTPRQQ9UMZ3 2332 aa22.25■■□□□ 1.15
TDP1-216ENST00000556867 ADAMTS20P59510 1910 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 H3BMM5 538 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 NDC80O14777 642 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 TP73O15350 636 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 KIF1CO43896 1103 aaKnown RBP22.24■■□□□ 1.15
TDP1-216ENST00000556867 BANF1O75531 89 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 SLCO2B1O94956 709 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 TTC4O95801 387 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 RAB15P59190 212 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 PPP1CAP62136 330 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 C2orf54Q08AI8 447 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 HSPA14Q0VDF9 509 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 CRYMQ14894 314 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 BBS9Q3SYG4 887 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 TMEM164Q5U3C3 297 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 MAATS1Q7Z4T9 603 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 TBC1D21Q8IYX1 336 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 OR52E1Q8NGJ3 308 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 CALML6Q8TD86 181 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 KCNE4Q8WWG9 221 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 LCN9Q8WX39 176 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 ART4Q93070 314 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 CD180Q99467 661 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 HGH1Q9BTY7 390 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 TFB2MQ9H5Q4 396 aaKnown RBP22.24■■□□□ 1.15
TDP1-216ENST00000556867 HRASLS2Q9NWW9 162 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 SIDT1Q9NXL6 827 aaKnown RBP22.24■■□□□ 1.15
TDP1-216ENST00000556867 FOXJ2Q9P0K8 574 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 ASF1AQ9Y294 204 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 ZFHX4Q86UP3 3567 aa22.24■■□□□ 1.15
TDP1-216ENST00000556867 OR6C74A6NCV1 312 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 KPNA5O15131 536 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 RASSF9O75901 435 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 S1PR4O95977 384 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 CD82P27701 267 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 FMO4P31512 558 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 RPL21P46778 160 aaKnown RBP22.23■■□□□ 1.15
TDP1-216ENST00000556867 CSE1LP55060 971 aaKnown RBP22.23■■□□□ 1.15
TDP1-216ENST00000556867 MC2RQ01718 297 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 HIF1AQ16665 826 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 CACHD1Q5VU97 1274 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 FAM92BQ6ZTR7 304 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 VRK3Q8IV63 474 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 DENND6AQ8IWF6 608 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 SPACA3Q8IXA5 215 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 OR4E2Q8NGC2 313 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 OR5AR1Q8NGP9 310 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 OR5K2Q8NHB8 316 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 KLHL6Q8WZ60 621 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 UBXN4Q92575 508 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 LRRC39Q96DD0 335 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 NAF1Q96HR8 494 aaKnown RBP22.23■■□□□ 1.15
TDP1-216ENST00000556867 FAM167BQ9BTA0 163 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 DPH1Q9BZG8 443 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 TRIT1Q9H3H1 467 aaKnown RBP22.23■■□□□ 1.15
TDP1-216ENST00000556867 SRMSQ9H3Y6 488 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 SLC39A1Q9NY26 324 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.23■■□□□ 1.15
TDP1-216ENST00000556867 CRYL1Q9Y2S2 319 aa22.23■■□□□ 1.15
TDP1-216ENST00000556867 SDK2Q58EX2 2172 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 TLCD2A6NGC4 264 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 MATN2O00339 956 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 RAD51CO43502 376 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 ITPKBP27987 946 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 SLC1A2P43004 574 aa22.22■■□□□ 1.15
TDP1-216ENST00000556867 ABCG1P45844 678 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms