RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 LINC00303Q3SY05 128 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 KLHL35Q6PF15 583 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 OOSP2Q86WS3 158 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 NLGN4XQ8N0W4 816 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 ACVR1CQ8NER5 493 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 SPATA4Q8NEY3 305 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 PPHLN1Q8NEY8 458 aaKnown RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 NLGN4YQ8NFZ3 816 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 OR52E1Q8NGJ3 308 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 UBXN4Q92575 508 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 PPM1MQ96MI6 270 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 OR6C1Q96RD1 312 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 CD180Q99467 661 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 MAP3K3Q99759 626 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 SLC12A9Q9BXP2 914 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 TWSG1Q9GZX9 223 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 POMT2Q9UKY4 750 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 HEBP2Q9Y5Z4 205 aa10.05□□□□□ -0.8
SHMT2-224ENST00000556737 V9GYY5 206 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-224ENST00000556737 BOD1L1Q8NFC6 3051 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 BHMG1C9JSJ3 638 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 QSOX1O00391 747 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 LIN7AO14910 233 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 TMEM63AO94886 807 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 FTH1P02794 183 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 EBLN1P0CF75 366 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ACADLP28330 430 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 SESN2P58004 480 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CYP4F2P78329 520 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 FOXM1Q08050 763 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ABHD18Q0P651 414 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 TUBB3Q13509 450 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 LAMB3Q13751 1172 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 LY6DQ14210 128 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 IL11RAQ14626 422 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CYP1B1Q16678 543 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 PCID2Q5JVF3 399 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 NAPRTQ6XQN6 538 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 NLRP9Q7RTR0 991 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 GSTA5Q7RTV2 222 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 LDB1Q86U70 411 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 KMT5CQ86Y97 462 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 UNC5BQ8IZJ1 945 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CARFQ8N187 725 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 IL22RA1Q8N6P7 574 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 OR5AR1Q8NGP9 310 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 OR4L1Q8NH43 312 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ELMO1Q92556 727 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 KRT12Q99456 494 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ULBP3Q9BZM4 244 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 IL22Q9GZX6 179 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 MVB12BQ9H7P6 319 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CHRAC1Q9NRG0 131 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 HOMER3Q9NSC5 361 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 HRASLS2Q9NWW9 162 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 SYBUQ9NX95 663 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 TTC7AQ9ULT0 858 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-224ENST00000556737 ICKQ9UPZ9 632 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CDYLQ9Y232 598 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 NEU2Q9Y3R4 380 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 COLEC10Q9Y6Z7 277 aa10.04□□□□□ -0.8
SHMT2-224ENST00000556737 CCDC188H7C350 402 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 IFRD1O00458 451 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 BTN3A3O00478 584 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 BTN3A1O00481 513 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 ITGB2P05107 769 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 RHOXF2BP0C7M4 288 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 TPBGLP0DKB5 382 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 POLR2CP19387 275 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 MGAT1P26572 445 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 MAP4P27816 1152 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 NMBRP28336 390 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 CCR7P32248 378 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 VPS41P49754 854 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 PRAMEP78395 509 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 CDK16Q00536 496 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 TRIP13Q15645 432 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 TAF1BQ53T94 588 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 LYPLAL1Q5VWZ2 237 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 LRRC8BQ6P9F7 803 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 VRK3Q8IV63 474 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 ADGRF3Q8IZF5 1079 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 MPP5Q8N3R9 675 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 D2HGDHQ8N465 521 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 ESX1Q8N693 406 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 SIDT2Q8NBJ9 832 aaKnown RBP10.03□□□□□ -0.8
SHMT2-224ENST00000556737 PHC3Q8NDX5 983 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 OR4E2Q8NGC2 313 aa10.03□□□□□ -0.8
SHMT2-224ENST00000556737 OR6P1Q8NGX9 317 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms