RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ATP13A4Q4VNC1 1196 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 VWA2Q5GFL6 755 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 GPRC6AQ5T6X5 926 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 ZDHHC20Q5W0Z9 365 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-219ENST00000556432 CDHR3Q6ZTQ4 885 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 BCORP1Q8N888 145 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 ACVR1CQ8NER5 493 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 SPATA22Q8NHS9 363 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 FAM71BQ8TC56 605 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 RMDN2Q96LZ7 410 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 EPS8L2Q9H6S3 715 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 TXLNGQ9NUQ3 528 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 HEY1Q9Y5J3 304 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 MED13LQ71F56 2210 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 MYO7BQ6PIF6 2116 aa13.49□□□□□ -0.25
ACTN1-219ENST00000556432 FER1L5A0AVI2 2057 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 GLYATL1P3A0A0U1RQE8 302 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 MGAT4DA6NG13 374 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 AGPSO00116 658 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 MYO1FO00160 1098 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 ARSEP51690 589 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 SOX8P57073 446 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 MYL5Q02045 173 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
ACTN1-219ENST00000556432 ITGA9Q13797 1035 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 PDK2Q15119 407 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 NOMO1Q15155 1222 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 TLR1Q15399 786 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-219ENST00000556432 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 NAT14Q8WUY8 206 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 ITLN2Q8WWU7 325 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-219ENST00000556432 FERD3LQ96RJ6 166 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 AP1M1Q9BXS5 423 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 SLC25A51Q9H1U9 297 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 UBP1Q9NZI7 540 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 DHCR7Q9UBM7 475 aaKnown RBP13.48□□□□□ -0.25
ACTN1-219ENST00000556432 PKP3Q9Y446 797 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 AP1M2Q9Y6Q5 423 aa13.48□□□□□ -0.25
ACTN1-219ENST00000556432 TRGV8A0A0C4DH27 118 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 C2orf74A8MZ97 194 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 BTN3A1O00481 513 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 BUD23O43709 281 aaKnown RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 UMODP07911 640 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 SKILP12757 684 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 HMGCLP35914 325 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 PRKD1Q15139 912 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 E4F1Q66K89 784 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 DAAM2Q86T65 1068 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 SLC25A41Q8N5S1 370 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 PQLC3Q8N755 202 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 OR2L2Q8NH16 312 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 PROKR1Q8TCW9 393 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 PITPNM3Q9BZ71 974 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 SPRTNQ9H040 489 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 ISCUQ9H1K1 167 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 SLC6A20Q9NP91 592 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
ACTN1-219ENST00000556432 CDC23Q9UJX2 597 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 CCDC88CQ9P219 2028 aa13.47□□□□□ -0.25
ACTN1-219ENST00000556432 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 KLHL33A6NCF5 533 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 BTN3A3O00478 584 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 ZSCAN9O15535 394 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 DIAPH2O60879 1101 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 OTUD4Q01804 1114 aaKnown RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 NKAIN1Q4KMZ8 207 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 GFRALQ6UXV0 394 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 LINC00696Q6ZRV3 163 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 GLT6D1Q7Z4J2 308 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 MRGPRGQ86SM5 289 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 TRIM73Q86UV7 250 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 CFAP206Q8IYR0 622 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 LILRA3Q8N6C8 439 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 ZNF655Q8N720 491 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 C19orf47Q8N9M1 422 aaKnown RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 BLOC1S5Q8TDH9 187 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-219ENST00000556432 RELTQ969Z4 430 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 NRTNQ99748 197 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 CCM2Q9BSQ5 444 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 TRABDQ9H4I3 376 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 XKR8Q9H6D3 395 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 AIPL1Q9NZN9 384 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 SH3BGRL2Q9UJC5 107 aa13.46□□□□□ -0.25
ACTN1-219ENST00000556432 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms