RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 FGF21Q9NSA1 209 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 VPS18Q9P253 973 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 APEX2Q9UBZ4 518 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CD84Q9UIB8 345 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF281Q9Y2X9 895 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 POLR3KQ9Y2Y1 108 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-236ENST00000556220 PPIL1Q9Y3C6 166 aa6.7□□□□□ -1.34
ATXN3-236ENST00000556220 MAP1AP78559 2803 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 A0A1W2PQJ5 194 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SHISA3A0PJX4 238 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 FAM170AA1A519 330 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 NPIPB15A6NHN6 443 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 ARHGAP42A6NI28 874 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CREB3O43889 395 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SOCS5O75159 536 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SCRG1O75711 98 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CPP00450 1065 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 ATP1A1P05023 1023 aaKnown RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CAPN1P07384 714 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 EBLN1P0CF75 366 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CD99P14209 185 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CYP11B1P15538 503 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CAPZBP47756 277 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 RENBPP51606 427 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TUBB4BP68371 445 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TEKQ02763 1124 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 STIM1Q13586 685 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TUBB2AQ13885 445 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 PTPRRQ15256 657 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SMTNL2Q2TAL5 461 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 IRGCQ6NXR0 463 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 GBP6Q6ZN66 633 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 REC114Q7Z4M0 266 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 MRGPRGQ86SM5 289 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 RAB43Q86YS6 212 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TMEM126BQ8IUX1 230 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 PHYKPLQ8IUZ5 450 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TRIM48Q8IWZ4 208 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 FAM71AQ8IYT1 594 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 DSELQ8IZU8 1212 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 GALNT16Q8N428 558 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 D2HGDHQ8N465 521 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 AOPEPQ8N6M6 819 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 MSANTD4Q8NCY6 345 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 OR8K5Q8NH50 307 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 FAM172AQ8WUF8 416 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 CELF6Q96J87 481 aaKnown RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 FER1L6-AS2Q96M78 137 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 IP6K3Q96PC2 410 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 PSKH2Q96QS6 385 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 MCCC1Q96RQ3 725 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 MLPHQ9BV36 600 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 TUBB2BQ9BVA1 445 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 SLC39A8Q9C0K1 460 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 ZBTB20Q9HC78 741 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 METTL5Q9NRN9 209 aaKnown RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 KCND1Q9NSA2 647 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 POT1Q9NUX5 634 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF624Q9P2J8 865 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-236ENST00000556220 FER1L5A0AVI2 2057 aa6.69□□□□□ -1.34
ATXN3-236ENST00000556220 PCSK5Q92824 1860 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 A0A0U1RQS6 177 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 RGS13O14921 159 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 FGF10O15520 208 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 KCNN4O15554 427 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 GRID2O43424 1007 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 NUAK1O60285 661 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SMC2O95347 1197 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 LSM8O95777 96 aaKnown RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 IGHEP01854 428 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 PNMA6AP0CW24 399 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 PON1P27169 355 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 RORAP35398 523 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 PTPN9P43378 593 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SOX8P57073 446 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 IL10RBQ08334 325 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 SSPNQ14714 243 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 EXOC3L4Q17RC7 722 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 DCAF10Q5QP82 559 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 LRRC66Q68CR7 880 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 RPTNQ6XPR3 784 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 CERS6Q6ZMG9 384 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 USP45Q70EL2 814 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 KMT5CQ86Y97 462 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 RBM12BQ8IXT5 1001 aaKnown RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 GOLM1Q8NBJ4 401 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 CLEC1AQ8NC01 280 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 DNAJB14Q8TBM8 379 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 COG1Q8WTW3 980 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 PIH1D2Q8WWB5 315 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 CPA5Q8WXQ8 436 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 ZNF501Q96CX3 271 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-236ENST00000556220 C14orf79Q96F83 325 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 GBP4Q96PP9 640 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 TRAPPC9Q96Q05 1148 aa6.68□□□□□ -1.34
ATXN3-236ENST00000556220 MAP3K3Q99759 626 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms