RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 GSAPA4D1B5 854 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 ARGFXA6NJG6 315 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 MEN1O00255 615 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 IFRD1O00458 451 aaPredicted RBP18.28■□□□□ 0.52
CDKN3-209ENST00000556102 CCL22O00626 93 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 LDB2O43679 373 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 RAB40ALP0C0E4 278 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 MSL3P1P0C860 447 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 MC4RP32245 332 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 CETN2P41208 172 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 CD151P48509 253 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 PGDP52209 483 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 RWDD2BP57060 319 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 CHAF1BQ13112 559 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF658BQ4V348 819 aaPredicted RBP18.28■□□□□ 0.52
CDKN3-209ENST00000556102 PRAMEF17Q5VTA0 474 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 ADAMTS17Q8TE56 1095 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 DNAJC1Q96KC8 554 aaKnown RBP18.28■□□□□ 0.52
CDKN3-209ENST00000556102 ING2Q9H160 280 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 VPS37BQ9H9H4 285 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 MLXIPLQ9NP71 852 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 ACSS2Q9NR19 701 aa18.28■□□□□ 0.52
CDKN3-209ENST00000556102 SPTBN1Q01082 2364 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 TRBV5-4A0A0C4DH59 114 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 RCCD1A6NED2 376 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 TMEM150CB9EJG8 249 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 BTN3A3O00478 584 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 BTN3A1O00481 513 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 TJP3O95049 919 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 GP1BBP13224 206 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ST6GAL1P15907 406 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ACRV1P26436 265 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 PRDX3P30048 256 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 RORAP35398 523 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 PREPP48147 710 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 CCL11P51671 97 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 RPA4Q13156 261 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 SPARCL1Q14515 664 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF789Q5FWF6 425 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 PAPD7Q5XG87 772 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 LCN10Q6JVE6 187 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF449Q6P9G9 518 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 SERPINA9Q86WD7 417 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ENDOVQ8N8Q3 282 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 OR52E1Q8NGJ3 308 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 OR1L3Q8NH93 324 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 CLIP3Q96DZ5 547 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 NLNQ9BYT8 704 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 PITPNM3Q9BZ71 974 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 TFB2MQ9H5Q4 396 aaKnown RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 MVB12BQ9H7P6 319 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 ACTR5Q9H9F9 607 aaPredicted RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 SNX7Q9UNH6 387 aa18.27■□□□□ 0.52
CDKN3-209ENST00000556102 EPN1Q9Y6I3 576 aaPredicted RBP18.27■□□□□ 0.52
CDKN3-209ENST00000556102 TTLL8A6PVC2 850 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 H7C0S8 307 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 MAP3K7O43318 606 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 GSTM1P09488 218 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 CYP2A7P20853 494 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 PTGIRP43119 386 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 CDKN1CP49918 316 aaPredicted RBP18.26■□□□□ 0.51
CDKN3-209ENST00000556102 GSTM4Q03013 218 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 ZRANB3Q5FWF4 1079 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 AADACL2Q6P093 401 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 EFCAB3Q8N7B9 438 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 PCMTD2Q9NV79 361 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 NLE1Q9NVX2 485 aaPredicted RBP18.26■□□□□ 0.51
CDKN3-209ENST00000556102 TCFL5Q9UL49 500 aa18.26■□□□□ 0.51
CDKN3-209ENST00000556102 BTNL10A8MVZ5 291 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 IPO7O95373 1038 aaKnown RBP18.25■□□□□ 0.51
CDKN3-209ENST00000556102 CAPN1P07384 714 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 PDHA2P29803 388 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 LMAN1P49257 510 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 NAP1L1P55209 391 aaKnown RBP18.25■□□□□ 0.51
CDKN3-209ENST00000556102 BOP1Q14137 746 aaKnown RBP18.25■□□□□ 0.51
CDKN3-209ENST00000556102 KCTD11Q693B1 232 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 FAM198BQ6UWH4 519 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 ARHGEF18Q6ZSZ5 1173 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 TAS2R42Q7RTR8 314 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 AMIGO1Q86WK6 493 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 SYTL1Q8IYJ3 562 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 PHC3Q8NDX5 983 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 ALG3Q92685 438 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 TFGQ92734 400 aaPredicted RBP18.25■□□□□ 0.51
CDKN3-209ENST00000556102 TRAPPC9Q96Q05 1148 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 PANX2Q96RD6 677 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 HGH1Q9BTY7 390 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 SERTAD3Q9UJW9 196 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 PCDHGB7Q9Y5F8 929 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 DUSP10Q9Y6W6 482 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 FER1L5A0AVI2 2057 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 SHANK1Q9Y566 2161 aa18.25■□□□□ 0.51
CDKN3-209ENST00000556102 SOWAHDA6NJG2 315 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 C2orf74A8MZ97 194 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 VPS4BO75351 444 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 CEACAM4O75871 244 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 TMEM63AO94886 807 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 PRSS56P0CW18 603 aa18.24■□□□□ 0.51
CDKN3-209ENST00000556102 ITGA1P56199 1179 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms