RNA–Protein interactions for RNA: ENST00000555246.5

LINC00871-201, long intergenic non-protein coding RNA 871, humanhuman

TSL 5 BASIC

Gene LINC00871, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-201ENST00000555246 TMEM115Q12893 351 aaPredicted RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TUBB3Q13509 450 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SEMA5AQ13591 1074 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 DNASE1L3Q13609 305 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ITGA9Q13797 1035 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TUBB2AQ13885 445 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TFDP2Q14188 446 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SETDB1Q15047 1291 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SLC1A5Q15758 541 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 DEFB109BQ30KR1 87 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ZNF658BQ4V348 819 aaPredicted RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 BCL7AQ4VC05 210 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 CAVIN1Q6NZI2 390 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 CRTC3Q6UUV7 619 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 KDELC1Q6UW63 502 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 C1orf229Q6ZS94 237 aaPredicted RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 BZW1Q7L1Q6 419 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 KDELC2Q7Z4H8 507 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SYVN1Q86TM6 617 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 LUZP1Q86V48 1076 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 AMZ2Q86W34 360 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 PTRH1Q86Y79 214 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 HPS6Q86YV9 775 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 WFDC8Q8IUA0 241 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TRAPPC5Q8IUR0 188 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TRIM48Q8IWZ4 208 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 D2HGDHQ8N465 521 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 GALNT6Q8NCL4 622 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 GALNT11Q8NCW6 608 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 CCNYQ8ND76 341 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 OR8K1Q8NGG5 319 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ADAMTS17Q8TE56 1095 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 CXorf40BQ96DE9 158 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TGM7Q96PF1 710 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 OR6C1Q96RD1 312 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TUBB2BQ9BVA1 445 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 PACSIN1Q9BY11 444 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 GPR63Q9BZJ6 419 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TWSG1Q9GZX9 223 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 OSGEPL1Q9H4B0 414 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ACTL8Q9H568 366 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 KIR3DX1Q9H7L2 352 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 GLOD4Q9HC38 313 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SYTL2Q9HCH5 934 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 PDE7BQ9NP56 450 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 IL26Q9NPH9 171 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 FAM153AQ9UHL3 310 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 GDF2Q9UK05 429 aaPredicted RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ADAM30Q9UKF2 790 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 PADI1Q9ULC6 663 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SHOC2Q9UQ13 582 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TP53TG5Q9Y2B4 290 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 MAN2B2Q9Y2E5 1009 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 WDR37Q9Y2I8 494 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 HEY1Q9Y5J3 304 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 SPO11Q9Y5K1 396 aa4.89□□□□□ -1.63
LINC00871-201ENST00000555246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 MRPS18BQ9Y676 258 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 ZNF106Q9H2Y7 1883 aaKnown RBP4.89□□□□□ -1.63
LINC00871-201ENST00000555246 TEX15Q9BXT5 2789 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 IGLV3-16A0A075B6K0 115 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 IGHV5-51A0A0C4DH38 117 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 LOC100289279A0A1B0GTE1 492 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 PRAMEF27A3QJZ7 478 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 K7EM74 188 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 M0R082 166 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 AGRPO00253 132 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 MATN2O00339 956 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 DDX3YO15523 660 aaKnown RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 PSTPIP1O43586 416 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 SGTAO43765 313 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 KIF1CO43896 1103 aaKnown RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 SUSD5O60279 629 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 ADAM11O75078 769 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 MTX2O75431 263 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 RASSF9O75901 435 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 TIAF1O95411 115 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 ZBTB11O95625 1053 aaPredicted RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 TPM3P06753 285 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 RAB40ALP0C0E4 278 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 PIRTP0C851 137 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 MTHFD1P11586 935 aaKnown RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 TYRP1P17643 537 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 AMD1P17707 334 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 RPL10P27635 214 aaKnown RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 PTPN4P29074 926 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 RORAP35398 523 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 GJC1P36383 396 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 SPAM1P38567 509 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 SSR1P43307 286 aaKnown RBP4.88□□□□□ -1.63
LINC00871-201ENST00000555246 MAPK9P45984 424 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 CTSCP53634 463 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 WNT3AP56704 352 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 GSDMDP57764 484 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 PPP1CAP62136 330 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 FOXM1Q08050 763 aa4.88□□□□□ -1.63
LINC00871-201ENST00000555246 AP1B1Q10567 949 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms