RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PIM1P11309 404 aaPredicted RBP17.08■□□□□ 0.32
SHOX-204ENST00000554971 ME2P23368 584 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 ITPKAP23677 461 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 MAOBP27338 520 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 NBL1P41271 181 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 PTSQ03393 145 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 LRRC66Q68CR7 880 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 USP45Q70EL2 814 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 LPCAT2Q7L5N7 544 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 OR6P1Q8NGX9 317 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 C1orf216Q8TAB5 229 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 HDAC10Q969S8 669 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
SHOX-204ENST00000554971 FAM192AQ9GZU8 254 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 TMEM74BQ9NUR3 256 aa17.08■□□□□ 0.32
SHOX-204ENST00000554971 CEP250Q9BV73 2442 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 LINGO3P0C6S8 592 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 C6P13671 934 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 VIPR1P32241 457 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 CCR5P51681 352 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 RPS21P63220 83 aaKnown RBP17.07■□□□□ 0.32
SHOX-204ENST00000554971 PDCD2Q16342 344 aaPredicted RBP17.07■□□□□ 0.32
SHOX-204ENST00000554971 C11orf74Q86VG3 221 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 RHEBL1Q8TAI7 183 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 CCDC124Q96CT7 223 aaKnown RBP17.07■□□□□ 0.32
SHOX-204ENST00000554971 CATSPER2Q96P56 530 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 CDRT15Q96T59 188 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 PHOX2BQ99453 314 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 C1QTNF2Q9BXJ5 285 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 PCED1AQ9H1Q7 454 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 WDR41Q9HAD4 459 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 ZNF106Q9H2Y7 1883 aaKnown RBP17.07■□□□□ 0.32
SHOX-204ENST00000554971 ADAMTS9Q9P2N4 1935 aa17.07■□□□□ 0.32
SHOX-204ENST00000554971 WNT9AO14904 365 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 SMIM24O75264 130 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 CLDN7O95471 211 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 FDXRP22570 491 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 PSMA3P25788 255 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 CCR10P46092 362 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 OR52E8Q6IFG1 317 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 KIAA1161Q6NSJ0 714 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 RFLNAQ6ZTI6 216 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 PTAR1Q7Z6K3 402 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 CUZD1Q86UP6 607 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 DNASE2BQ8WZ79 361 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 RCN3Q96D15 328 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 TRAPPC9Q96Q05 1148 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 EIF2B4Q9UI10 523 aaKnown RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 GOLGA8CPA6NN73 597 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 H3BNX3 289 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 RAD51BO15315 384 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 BCAS2O75934 225 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 PAK4O96013 591 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 ELFN1P0C7U0 828 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 UQCRBP14927 111 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 DHPSP49366 369 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 ACADVLP49748 655 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 TCHHL1Q5QJ38 904 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 OGFRL1Q5TC84 451 aaPredicted RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 HACD2Q6Y1H2 254 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 LYSMD3Q7Z3D4 306 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 HSD11B1LQ7Z5J1 315 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 ISCA2Q86U28 154 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 TCF12Q99081 682 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 NDNQ99608 321 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 SLC17A9Q9BYT1 436 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 MAGEE1Q9HCI5 957 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 FZD3Q9NPG1 666 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
SHOX-204ENST00000554971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.06■□□□□ 0.32
SHOX-204ENST00000554971 ADAMTS6Q9UKP5 1117 aa17.06■□□□□ 0.32
SHOX-204ENST00000554971 C1orf232A0A0U1RR37 186 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 A0A1W2PPC4 97 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 UBDO15205 165 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 SLC31A1O15431 190 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 LYNP07948 512 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 FGF4P08620 206 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 C1SP09871 688 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 CREB5Q02930 508 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 MED21Q13503 144 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 FLOT2Q14254 428 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 ZNF789Q5FWF6 425 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 RNF111Q6ZNA4 994 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 RAB44Q7Z6P3 723 aaPredicted RBP17.05■□□□□ 0.32
SHOX-204ENST00000554971 PQLC1Q8N2U9 271 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 SPATA6LQ8N4H0 392 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 CXorf40AQ8TE69 158 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 SNX19Q92543 992 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 COQ10AQ96MF6 247 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 TRAF6Q9Y4K3 522 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 TMEM131Q92545 1883 aa17.05■□□□□ 0.32
SHOX-204ENST00000554971 CD3EAPO15446 510 aaKnown RBP17.04■□□□□ 0.32
SHOX-204ENST00000554971 GPC4O75487 556 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 CRTAMO95727 393 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 CYP2A6P11509 494 aaPredicted RBP17.04■□□□□ 0.32
SHOX-204ENST00000554971 ETV3P41162 512 aa17.04■□□□□ 0.32
SHOX-204ENST00000554971 HERVK_113P63132 956 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms