RNA–Protein interactions for RNA: ENST00000554666.5

PAPOLA-209, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-209	ENST00000554666	RAF1	P04049	648 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	CLTB	P09497	229 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	VPREB1	P12018	145 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	DPEP1	P16444	411 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	CDH11	P55287	796 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	PPP2R2B	Q00005	443 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	PNRC1	Q12796	327 aa	Predicted RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	PRKAA1	Q13131	559 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	DLG2	Q15700	870 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	LPAL2	Q16609	132 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	KRT71	Q3SY84	523 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	PLEKHS1	Q5SXH7	462 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	ARHGEF16	Q5VV41	709 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	ZNF613	Q6PF04	617 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	SLC16A9	Q7RTY1	509 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	RPAP2	Q8IXW5	612 aa	Predicted RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	ZNF440	Q8IYI8	595 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	ZNF614	Q8N883	585 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	ERLEC1	Q96DZ1	483 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	FAM81B	Q96LP2	452 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	NEK1	Q96PY6	1258 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	TREX2	Q9BQ50	279 aa	Predicted RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	VN1R1	Q9GZP7	353 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	SMARCAD1	Q9H4L7	1026 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	SYNC	Q9H7C4	482 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	SEPT11	Q9NVA2	429 aa	Known RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	PSD3	Q9NYI0	1048 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	OSGIN1	Q9UJX0	560 aa		3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666	EXOG	Q9Y2C4	368 aa	Known RBP	3.66	□□□□□ -1.82
PAPOLA-209	ENST00000554666		A0A1B0GVY2	172 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666		E9PI62	339 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666		H7C423	109 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	DNM1L	O00429	736 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	KHDRBS3	O75525	346 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TRMU	O75648	421 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	NGF	P01138	241 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MAGEA11	P43364	429 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PNLIPRP2	P54317	469 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	HERV-K104	P61576	105 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SNRPD1	P62314	119 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	KRT33B	Q14525	404 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	FAM98B	Q52LJ0	330 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MDH1B	Q5I0G3	518 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TCTE1	Q5JU00	501 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	KRT79	Q5XKE5	535 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	CORO6	Q6QEF8	472 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	RSRC2	Q7L4I2	434 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SPEM1	Q8N4L4	309 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TTC39C	Q8N584	583 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	BMPER	Q8N8U9	685 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ZNF383	Q8NA42	475 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ANKRD52	Q8NB46	1076 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	FGFBP3	Q8TAT2	258 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	GRHL3	Q8TE85	626 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	DYRK2	Q92630	601 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	OR6C1	Q96RD1	312 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	BTBD10	Q9BSF8	475 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	UBXN6	Q9BZV1	441 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SPATC1L	Q9H0A9	340 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ARRDC1-AS1	Q9H2J1	176 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	KCNK15	Q9H427	330 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ZHX3	Q9H4I2	956 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TAS2R14	Q9NYV8	317 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ZDHHC2	Q9UIJ5	367 aa		3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	LAS1L	Q9Y4W2	734 aa	Known RBP	3.65	□□□□□ -1.83
PAPOLA-209	ENST00000554666	LOC101059948	A0A1B0GTJ6	334 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PTP4A3	O75365	173 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ACP2	P11117	423 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MMP9	P14780	707 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ACSL1	P33121	698 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	GARS	P41250	739 aa	Known RBP	3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MFAP4	P55083	255 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	CX3CL1	P78423	397 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	CDR2	Q01850	454 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PWWP2B	Q6NUJ5	590 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	CLEC17A	Q6ZS10	378 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	RNF128	Q8TEB7	428 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	HPSE2	Q8WWQ2	592 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SUSD6	Q92537	303 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SRSF8	Q9BRL6	282 aa	Known RBP	3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	FGFBP2	Q9BYJ0	223 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	P2RY12	Q9H244	342 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ZNF701	Q9NV72	531 aa	Predicted RBP	3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	LARS	Q9P2J5	1176 aa	Known RBP	3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	ZNF148	Q9UQR1	794 aa		3.64	□□□□□ -1.83
PAPOLA-209	ENST00000554666	LOC100509620	A0A075B734	347 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	VILL	O15195	856 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PAPSS1	O43252	624 aa	Predicted RBP	3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	PRAMEF11	O60813	436 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MED24	O75448	989 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TPO	P07202	933 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TRIM49	P0CI25	452 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	TRIM49C	P0CI26	452 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	MAPK4	P31152	587 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	SNX16	P57768	344 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	CDK3	Q00526	305 aa		3.63	□□□□□ -1.83
PAPOLA-209	ENST00000554666	RAB41	Q5JT25	222 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms