RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SNX10Q9Y5X0 201 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ALDH4A1P30038 563 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ATXN1P54253 815 aaKnown RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 GPX6P59796 221 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 CRYBG2Q8N1P7 616 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 LRRC20Q8TCA0 184 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 IMP3Q9NV31 184 aaKnown RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF282Q9UDV7 671 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 YJEFN3A6XGL0 299 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 CHP2O43745 196 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 SNX4O95219 450 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 XRCC1P18887 633 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 LMO2P25791 158 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 AP3S2P59780 193 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ARPC4P59998 168 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 FOXM1Q08050 763 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 NOL9Q5SY16 702 aaKnown RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ANO7Q6IWH7 933 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 PHYKPLQ8IUZ5 450 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 HID1Q8IV36 788 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 HBEGFQ99075 208 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 CCDC177Q9NQR7 707 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 NECTIN3Q9NQS3 549 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 CALML5Q9NZT1 146 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 RIMBP3CA6NJZ7 1639 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 RIMBP3BA6NNM3 1639 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 RIMBP3Q9UFD9 1639 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 CXorf49A8MYA2 514 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TREHO43280 583 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 NOBOXO60393 691 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 ATP6V1G1O75348 118 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 SAGP10523 405 aaPredicted RBP13.74□□□□□ -0.21
VTI1B-204ENST00000554659 MAPK12P53778 367 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM198Q66K66 360 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 OGFOD2Q6N063 350 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TMEM209Q96SK2 561 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 TBC1D14Q9P2M4 693 aa13.74□□□□□ -0.21
VTI1B-204ENST00000554659 MYBPHLA2RUH7 354 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 RIIAD1A6NNX1 92 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 DBIP07108 87 aaKnown RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 LAMP2P13473 410 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 CD247P20963 164 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 HCAR3P49019 387 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ATCAYQ86WG3 371 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 FIBCD1Q8N539 461 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ING5Q8WYH8 240 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PLD4Q96BZ4 506 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 MARCH7Q9H992 704 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 IL1RAPQ9NPH3 570 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 EQTNQ9NQ60 294 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF358Q9NW07 568 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PADI3Q9ULW8 664 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PRAMEF33A0A0G2JMD5 474 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 EFCAB9A8MZ26 197 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 NT5C1B-RDH14C9J2C7 533 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 H0YGN5 161 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PRAMEF10O60809 474 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 FKBP1BP68106 108 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 FAM110CQ1W6H9 321 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 LINGO4Q6UY18 593 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 USP30Q70CQ3 517 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 GRPEL2Q8TAA5 225 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 LRRC58Q96CX6 371 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ZNF570Q96NI8 536 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 GPER1Q99527 375 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 MFSD1Q9H3U5 465 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 CKLFQ9UBR5 152 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PCDHGA11Q9Y5H2 935 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 NFS1Q9Y697 457 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 TEX264Q9Y6I9 313 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 WRBO00258 174 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ARPC2O15144 300 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 HCN1O60741 890 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 GADD45GO95257 159 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 ANXA8P13928 327 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 KELP23276 732 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 NSG1P42857 185 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PRR23BQ6ZRT6 265 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 PARGQ86W56 976 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 CLEC4CQ8WTT0 213 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 GTPBP3Q969Y2 492 aaKnown RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 CNPPD1Q9BV87 410 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 EBPLQ9BY08 206 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
VTI1B-204ENST00000554659 NME6O75414 186 aaPredicted RBP13.73□□□□□ -0.21
VTI1B-204ENST00000554659 MAZP56270 477 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms