RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 NFATC2Q13469 925 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PEX6Q13608 980 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GTF2H3Q13889 308 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 USP10Q14694 798 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CHRNA6Q15825 494 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TYSND1Q2T9J0 566 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 POM121L1PQ3SYA9 428 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CCDC153Q494R4 210 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TAF1BQ53T94 588 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TNFAIP8L3Q5GJ75 292 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MROH9Q5TGP6 573 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 HLA-DQA1Q5Y7H0 255 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 KCTD16Q68DU8 428 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 NAIF1Q69YI7 327 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PTRHD1Q6GMV3 140 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 KLC3Q6P597 504 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 KIAA1324Q6UXG2 1013 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 FAM151BQ6UXP7 276 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 Q6ZVL8 140 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 RAPH1Q70E73 1250 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TECPR1Q7Z6L1 1165 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TSPAN33Q86UF1 283 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TRABD2AQ86V40 505 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 EXOC3L1Q86VI1 746 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 DENND6AQ8IWF6 608 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SRRM1Q8IYB3 904 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GPR26Q8NDV2 337 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TSTD1Q8NFU3 115 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GDAP1Q8TB36 358 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CLDN23Q96B33 292 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ARL8AQ96BM9 186 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TLCD1Q96CP7 247 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AP2M1Q96CW1 435 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 NUS1Q96E22 293 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ELMO2Q96JJ3 720 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MRGPRX1Q96LB2 322 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 COQ10AQ96MF6 247 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 VPS35Q96QK1 796 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AGAP2Q99490 1192 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 COPS8Q99627 209 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GPR22Q99680 433 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CLPBQ9H078 707 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ABCG8Q9H221 673 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SUDS3Q9H7L9 328 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CNTD2Q9H8S5 307 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TBC1D17Q9HA65 648 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PLAC1Q9HBJ0 212 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 POPDC3Q9HBV1 291 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 IL26Q9NPH9 171 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SMYD2Q9NRG4 433 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 POLR3BQ9NW08 1133 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ERVK13-1Q9NX77 482 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TAS2R13Q9NYV9 303 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 KLHL42Q9P2K6 505 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GNPTGQ9UJJ9 305 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC39A10Q9ULF5 831 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MTO1Q9Y2Z2 717 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ACOT9Q9Y305 439 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 HS3ST3A1Q9Y663 406 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ADAMTS20P59510 1910 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KLHL33A6NCF5 533 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 OR51F1A6NGY5 319 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FAM47DPA6NHR8 397 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FADS2P1A8MWK0 482 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NUDT19A8MXV4 375 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 PRPF4O43172 522 aaKnown RBP eCLIP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 VEGFDO43915 354 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A9O60656 530 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 MAGEC1O60732 1142 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KCNJ13O60928 360 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NDUFS2O75306 463 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 GLRA3O75311 464 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RECQL5O94762 991 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RHOBTB1O94844 696 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 ZWINTO95229 277 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 APBB3O95704 486 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FTH1P02794 183 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 APOA4P06727 396 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 RBP1P09455 135 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NEFHP12036 1026 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 C6P13671 934 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 ATP1B2P14415 290 aaPredicted RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 GABRG2P18507 467 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KRT4P19013 534 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A6P19224 532 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 CHRM3P20309 590 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 TAC1P20366 129 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 NR1D1P20393 614 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 SAT1P21673 171 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A1P22309 533 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 UGT1A4P22310 534 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 LHCGRP22888 699 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 KELP23276 732 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 DGKAP23743 735 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 ACRV1P26436 265 aa4.94□□□□□ -1.62
VTI1B-202ENST00000553619 OAS2P29728 719 aaKnown RBP4.94□□□□□ -1.62
VTI1B-202ENST00000553619 FMO4P31512 558 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms