RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 NDUFAB1O14561 156 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 SIX3O95343 332 aaPredicted RBP13.44□□□□□ -0.26
APEX1-205ENST00000553555 VCLP18206 1134 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 CYP2A7P20853 494 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 CD27P26842 260 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 SERPINB5P36952 375 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 MAPK9P45984 424 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 RPIAP49247 311 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 THOP1P52888 689 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
APEX1-205ENST00000553555 DMPKQ09013 629 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 SETDB1Q15047 1291 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 LSMEM2Q8N112 164 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 DEFB119Q8N690 84 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 PDPRQ8NCN5 879 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 OR13H1Q8NG92 308 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 FAM174AQ8TBP5 190 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 OR1E3Q8WZA6 343 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 SNX19Q92543 992 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 OR52A5Q9H2C5 316 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 KLC4Q9NSK0 619 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
APEX1-205ENST00000553555 DNAJC16Q9Y2G8 782 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 GPSM3Q9Y4H4 160 aa13.44□□□□□ -0.26
APEX1-205ENST00000553555 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 MAP3K13O43283 966 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 TGDSO95455 350 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 HSPA4LO95757 839 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 GUCA1CO95843 209 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 S100BP04271 92 aaPredicted RBP13.43□□□□□ -0.26
APEX1-205ENST00000553555 ACP5P13686 325 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 ACADLP28330 430 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 CCR10P46092 362 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 GNPDA1P46926 289 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 CDKL1Q00532 357 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 OVGP1Q12889 678 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 TSSK4Q6SA08 328 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 CRLF3Q8IUI8 442 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
APEX1-205ENST00000553555 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 PPP4R1Q8TF05 950 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 FOPNLQ96NB1 174 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 C1QTNF3Q9BXJ4 246 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 GSTO2Q9H4Y5 243 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 CARS2Q9HA77 564 aaKnown RBP13.43□□□□□ -0.26
APEX1-205ENST00000553555 PRMT8Q9NR22 394 aaPredicted RBP13.43□□□□□ -0.26
APEX1-205ENST00000553555 ACSL5Q9ULC5 683 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 PLEKHM1Q9Y4G2 1056 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 SLCO1B1Q9Y6L6 691 aa13.43□□□□□ -0.26
APEX1-205ENST00000553555 TP53BP1Q12888 1972 aaPredicted RBP13.43□□□□□ -0.26
APEX1-205ENST00000553555 PRR19A6NJB7 356 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 TAPBPO15533 448 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SNX3O60493 162 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SUPT7LO94864 414 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 CHRNGP07510 517 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 ANXA5P08758 320 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 HIST1H2AGP0C0S8 130 aaPredicted RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 TDGF1P13385 188 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 HIST1H2ADP20671 130 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 BCKDHBP21953 392 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 AGTR2P50052 363 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 PCBP2Q15366 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
APEX1-205ENST00000553555 FBXO48Q5FWF7 155 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 ARL13AQ5H913 290 aaPredicted RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 ANKS6Q68DC2 871 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SULT1C3Q6IMI6 304 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 FRMD7Q6ZUT3 714 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 RPS27LQ71UM5 84 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 TSACCQ96A04 125 aaPredicted RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 RHBDF1Q96CC6 855 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 KLHDC7BQ96G42 594 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 PDXPQ96GD0 296 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 HIST1H2AHQ96KK5 128 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 OR2M4Q96R27 311 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 HIST1H2AJQ99878 128 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 EGFL8Q99944 293 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 H2AFJQ9BTM1 129 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 ZDHHC5Q9C0B5 715 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 GPR27Q9NS67 375 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 KLQ9UEF7 1012 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 EIF2B4Q9UI10 523 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 PNMA8BQ9ULN7 279 aaPredicted RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 RAP2CQ9Y3L5 183 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 VCANP13611 3396 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 ARHGEF33A8MVX0 844 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 LAMTOR5O43504 91 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 CATP04040 527 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 RPS17P08708 135 aaKnown RBP13.42□□□□□ -0.26
APEX1-205ENST00000553555 THEGLP0DJG4 465 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 FNTBP49356 437 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 AP1S2P56377 157 aa13.42□□□□□ -0.26
APEX1-205ENST00000553555 SRP54P61011 504 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms