RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PTRH2Q9Y3E5 179 aaKnown RBP8.8□□□□□ -1
SYNE2-209ENST00000553308 PKP3Q9Y446 797 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 COLEC10Q9Y6Z7 277 aa8.8□□□□□ -1
SYNE2-209ENST00000553308 A0A1W2PQJ5 194 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 PEX12O00623 359 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 LRRTM2O43300 516 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 HCRTR1O43613 425 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 ZG16O60844 167 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 ALOX12BO75342 701 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 IPO13O94829 963 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 KRT1P04264 644 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 HADHAP40939 763 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 WASHC5Q12768 1159 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 MESDQ14696 234 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 ZRSR2Q15696 482 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 SLC1A5Q15758 541 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 HIF1AQ16665 826 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 CRYBG3Q68DQ2 2970 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 PPP1R32Q7Z5V6 425 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 TRIM73Q86UV7 250 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 KCNMB4Q86W47 210 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 CFAP206Q8IYR0 622 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 GPR135Q8IZ08 494 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 IPMKQ8NFU5 416 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 OR52E1Q8NGJ3 308 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 OR2Y1Q8NGV0 311 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 HM13Q8TCT9 377 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 ZNF398Q8TD17 642 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 CPLX3Q8WVH0 158 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 TM9SF4Q92544 642 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 GBP5Q96PP8 586 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 FERD3LQ96RJ6 166 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 WDR77Q9BQA1 342 aaPredicted RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 BPIFA3Q9BQP9 254 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 MAK16Q9BXY0 300 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 NAT10Q9H0A0 1025 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 XKR8Q9H6D3 395 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 FAM60AQ9NP50 221 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 AGPAT4Q9NRZ5 378 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 ACTR10Q9NZ32 417 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 SAE1Q9UBE0 346 aaPredicted RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 DHCR7Q9UBM7 475 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 GPN3Q9UHW5 284 aaPredicted RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 NOVA2Q9UNW9 492 aaKnown RBP8.79□□□□□ -1
SYNE2-209ENST00000553308 ENTPD4Q9Y227 616 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 CDYLQ9Y232 598 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 HEBP2Q9Y5Z4 205 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 ARL5AQ9Y689 179 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 PCM1Q15154 2024 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 NUP210LQ5VU65 1888 aa8.79□□□□□ -1
SYNE2-209ENST00000553308 CCDC88CQ9P219 2028 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 CCDC66A2RUB6 948 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 KLHL33A6NCF5 533 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 SMTNL1A8MU46 457 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 H3BMH7 237 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 STX7O15400 261 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 MAP3K7O43318 606 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 OR2B3O76000 313 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 SRP72O76094 671 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 SERPINC1P01008 464 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 EPOP01588 193 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 CTSBP07858 339 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 UMODP07911 640 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 HBQ1P09105 142 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 H2AFZP0C0S5 128 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 PECAM1P16284 738 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 ZFXP17010 805 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 PBX1P40424 430 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 TNNT3P45378 269 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 GABRA4P48169 554 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 PRLHRP49683 370 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 PER3P56645 1201 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 RIPPLY3P57055 190 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 ZBED6P86452 979 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 ZIC1Q15915 447 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 CYP2A13Q16696 494 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 RHBDD2Q6NTF9 364 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 MICALCLQ6ZW33 695 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 H2AFVQ71UI9 128 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 VSIG1Q86XK7 387 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 ADGRF3Q8IZF5 1079 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 C19orf47Q8N9M1 422 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 PHC3Q8NDX5 983 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 OR4K2Q8NGD2 314 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 GRHL3Q8TE85 626 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 TFB1MQ8WVM0 346 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 CTNNBL1Q8WYA6 563 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 N4BP2L2Q92802 583 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 MOCOSQ96EN8 888 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 RBM41Q96IZ5 413 aaKnown RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 LINC00615Q96LM1 132 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 C17orf62Q9BQA9 187 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 CCM2Q9BSQ5 444 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 HGH1Q9BTY7 390 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 SPRTNQ9H040 489 aaPredicted RBP8.78□□□□□ -1
SYNE2-209ENST00000553308 OR52A5Q9H2C5 316 aa8.78□□□□□ -1
SYNE2-209ENST00000553308 ASB8Q9H765 288 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms