RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 RTL10Q7L3V2 364 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 OTOP2Q7RTS6 562 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CENPSQ8N2Z9 138 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FAM86B1Q8N7N1 296 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ANKFN1Q8N957 763 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 C9orf16Q9BUW7 83 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 RERGLQ9H628 205 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 PKD2L2Q9NZM6 624 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SEPT3Q9UH03 358 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 COQ6Q9Y2Z9 468 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 INSL6Q9Y581 213 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ANGPTL3Q9Y5C1 460 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 OR51B4Q9Y5P0 310 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 MIA3Q5JRA6 1907 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 MTX2O75431 263 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 LDLRP01130 860 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 C1QCP02747 245 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 IMPDH2P12268 514 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 HLA-DPA1P20036 260 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 NEK2P51955 445 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 MLLT10P55197 1068 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ILF2Q12905 390 aaKnown RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF177Q13360 481 aaPredicted RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 CYBRD1Q53TN4 286 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 FAM180BQ6P0A1 224 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 TBC1D15Q8TC07 691 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 HM13Q8TCT9 377 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 FAR2Q96K12 515 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 DNMT3BQ9UBC3 853 aaKnown RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 LIMD1Q9UGP4 676 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 POLR3HQ9Y535 204 aaPredicted RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 URB1O60287 2271 aaKnown RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 CCDC154A6NI56 674 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 BMP10O95393 424 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 PRAMEF12O95522 483 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 LBPP18428 481 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 SHMT2P34897 504 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 HSPA7P48741 367 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 CCT8P50990 548 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 DNAJB13P59910 316 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 HERVK_113P63132 956 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 RPL38P63173 70 aaKnown RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ZXDBP98169 803 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 SIM2Q14190 667 aaPredicted RBP10.9□□□□□ -0.66
LINC00661-204ENST00000549354 SLC36A3Q495N2 470 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 FAM45BPQ6NSW5 357 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 CCDC149Q6ZUS6 474 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 GAREM2Q75VX8 874 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 KIAA2013Q8IYS2 634 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 TRPV3Q8NET8 790 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 OR4L1Q8NH43 312 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 FAM45AQ8TCE6 357 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 TANKQ92844 425 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 LINGO1Q96FE5 620 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 SLC22A12Q96S37 553 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ERVK-6Q9BXR3 956 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 ANAPC2Q9UJX6 822 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 PADI4Q9UM07 663 aa10.9□□□□□ -0.66
LINC00661-204ENST00000549354 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 K7ERQ8 282 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ACOX3O15254 700 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 SLC7A4O43246 635 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ECI2O75521 394 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 FGF1P05230 155 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 MBL2P11226 248 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 HK2P52789 917 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 OXCT1P55809 520 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 MEP1AQ16819 746 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ATP6AP1LQ52LC2 224 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 HTR3DQ70Z44 454 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 SLC22A9Q8IVM8 553 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 OR10A6Q8NH74 314 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 BIRC7Q96CA5 298 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 UBXN10Q96LJ8 280 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CATSPERZQ9NTU4 200 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 UBA2Q9UBT2 640 aaPredicted RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 GMEB1Q9Y692 573 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 LDB2O43679 373 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CD160O95971 181 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 BCL10O95999 233 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 RHOCP08134 193 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 MYF6P23409 242 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 WEE1P30291 646 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CAPGP40121 348 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 SMAD3P84022 425 aaKnown RBP10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CYP27C1Q4G0S4 372 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TMEM240Q5SV17 173 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 CPXM2Q8N436 756 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 KRTCAP2Q8N6L1 136 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TMCO5AQ8N6Q1 288 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 PHOSPHO2Q8TCD6 241 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 ALG14Q96F25 216 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 TSPAN17Q96FV3 270 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 NSMCE3Q96MG7 304 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 POLE4Q9NR33 117 aa10.89□□□□□ -0.67
LINC00661-204ENST00000549354 GID8Q9NWU2 228 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms