RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KRT12Q99456 494 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 C1QTNF7Q9BXJ2 289 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 RAB6CQ9H0N0 254 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 BRD7Q9NPI1 651 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 POT1Q9NUX5 634 aa4.79□□□□□ -1.64
SCAF11-212ENST00000549162 FAM47DPA6NHR8 397 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SYCE1LA8MT33 242 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 C1QTNF3-AMACRE9PGA6 284 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RASGRF2O14827 1237 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 PEX11AO75192 247 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 IL33O95760 270 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 NID1P14543 1247 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TAC1P20366 129 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ACP1P24666 158 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CSKP41240 450 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RABIFP47224 123 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CCT5P48643 541 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ITGA1P56199 1179 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 IL2P60568 153 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 HERVK_113P63132 956 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RPS21P63220 83 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CRADDP78560 199 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TEAD2Q15562 447 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 FAM153CQ494X1 144 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SLC25A30Q5SVS4 291 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 GARNL3Q5VVW2 1013 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CPNE8Q86YQ8 564 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 BBS7Q8IWZ6 715 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SLC44A3Q8N4M1 653 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TTLQ8NG68 377 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 AGAP11Q8TF27 550 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 UCMAQ8WVF2 138 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LIPHQ8WWY8 451 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ZUFSPQ96AP4 578 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 DACH2Q96NX9 599 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 PANX3Q96QZ0 392 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 DPH2Q9BQC3 489 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 FUZQ9BT04 418 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ERVK-6Q9BXR3 956 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ACTR5Q9H9F9 607 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SARS2Q9NP81 518 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LTB4R2Q9NPC1 389 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ACP6Q9NPH0 428 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 IL1RAPL1Q9NZN1 696 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MRPS17Q9Y2R5 130 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 KIR2DS5A0A0G2JLQ3 304 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 A0A0G2JNG1 304 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TCRBV7S3A2A0A539 114 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 HEPACAM2A8MVW5 462 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 KIR2DS3K7RE56 304 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MLYCDO95822 493 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 FTH1P02794 183 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 PTMAP06454 111 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ITGA2BP08514 1039 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RAB40ALP0C0E4 278 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 EPCAMP16422 314 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 NTSR1P30989 418 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CALCOCO2Q13137 446 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RCN2Q14257 317 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 KIR2DS5Q14953 304 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LLGL1Q15334 1064 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CNGA3Q16281 694 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 TMEM35AQ53FP2 167 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 IL27RAQ6UWB1 636 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 DET1Q7L5Y6 550 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ISCA2Q86U28 154 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 APLFQ8IW19 511 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MOAP1Q96BY2 351 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 AHCYL2Q96HN2 611 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SEMA3CQ99985 751 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 APOL5Q9BWW9 433 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MAGIXQ9H6Y5 334 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ZFP14Q9HCL3 533 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LYRM4Q9HD34 91 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 EMC7Q9NPA0 242 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LZTFL1Q9NQ48 299 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 NDFIP2Q9NV92 336 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 THAP1Q9NVV9 213 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 C14orf119Q9NWQ9 140 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 WSB2Q9NYS7 404 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 BFARQ9NZS9 450 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 BTNL2Q9UIR0 455 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 PRPF19Q9UMS4 504 aaKnown RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RAP2CQ9Y3L5 183 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SCN2AQ99250 2005 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CCDC195A0A1B0GUA6 201 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 C7orf72A4D263 438 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 DAPK3O43293 454 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 APODP05090 189 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ADORA2BP29275 332 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 NRIP1P48552 1158 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 IRAK1P51617 712 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 SEMA3AQ14563 771 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 RPS26P11Q5JNZ5 115 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF678Q5SXM1 525 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 MRNIPQ6NTE8 343 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 CYB5D1Q6P9G0 228 aa4.78□□□□□ -1.64
SCAF11-212ENST00000549162 LARP4Q71RC2 724 aaKnown RBP eCLIP4.78□□□□□ -1.641e-9■■■□□ 15.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms