RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PIRTP0C851 137 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 RALBP11234 206 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 SRCP12931 536 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC5A2P31639 672 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 ASPHQ12797 758 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 SETDB1Q15047 1291 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 TBR1Q16650 682 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 ZNF789Q5FWF6 425 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 RBM20Q5T481 1227 aaKnown RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 CES4AQ5XG92 561 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 LRRC8EQ6NSJ5 796 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 TBC1D1Q86TI0 1168 aaPredicted RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 C10orf107Q8IVU9 208 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 PCDH20Q8N6Y1 951 aaKnown RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 OR4K2Q8NGD2 314 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 WDR48Q8TAF3 677 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 CPEB1Q9BZB8 566 aaKnown RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 FAM96AQ9H5X1 160 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 ATP13A3Q9H7F0 1226 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 GEMIN8Q9NWZ8 242 aaKnown RBP19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 DNAJC28Q9NX36 388 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 KCNK4Q9NYG8 393 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC12A4Q9UP95 1085 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 CSNK1G3Q9Y6M4 447 aa19.63■□□□□ 0.73
CTDSP2-204ENST00000548823 A0A1W2PQ67 120 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 TRIM13O60858 407 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 MYL2P10916 166 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 CD9P21926 228 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 AKT2P31751 481 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 STK19P49842 368 aaPredicted RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 SUOXP51687 545 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 ARFIP2P53365 341 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 EPHB1P54762 984 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 ACTN3Q08043 901 aaPredicted RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 TGIF1Q15583 401 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 ZNF542PQ5EBM4 170 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 NEK5Q6P3R8 708 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 DCP2Q8IU60 420 aaKnown RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC22A18ASQ8N1D0 253 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 FITM2Q8N6M3 262 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 FAM174AQ8TBP5 190 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 KCTD4Q8WVF5 259 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 OR8D1Q8WZ84 308 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 UBXN10Q96LJ8 280 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 MRPL57Q9BQC6 102 aaKnown RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 STN1Q9H668 368 aaKnown RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 SUDS3Q9H7L9 328 aaPredicted RBP19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 KCNK13Q9HB14 408 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 OXSMQ9NWU1 459 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 IL17CQ9P0M4 197 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 PPIL1Q9Y3C6 166 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 ZNF711Q9Y462 761 aa19.62■□□□□ 0.73
CTDSP2-204ENST00000548823 TEP1Q99973 2627 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 OR51F1A6NGY5 319 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 STX7O15400 261 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 DNAJC6O75061 913 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 SNUPNO95149 360 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 LTA4HP09960 611 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 FDXRP22570 491 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 HNRNPA2B1P22626 353 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 SERPINA4P29622 427 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 HMGCLP35914 325 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 SKIV2L2P42285 1042 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 SLC1A6P48664 564 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 TAS2R38P59533 333 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 BNIP1Q12981 228 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 SRSF6Q13247 344 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 FAM83EQ2M2I3 478 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 AARS2Q5JTZ9 985 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 AGAP9Q5VTM2 703 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 C22orf39Q6P5X5 142 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 ABI3BPQ7Z7G0 1075 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 FSTL5Q8N475 847 aaPredicted RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 ZNF548Q8NEK5 533 aaPredicted RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 RFWD2Q8NHY2 731 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 FRS2Q8WU20 508 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 KLK6Q92876 244 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 LIN37Q96GY3 246 aaPredicted RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 LRRC37BQ96QE4 947 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 LYSMD1Q96S90 227 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 OLFM1Q99784 485 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 TM6SF2Q9BZW4 377 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 MRPL46Q9H2W6 279 aaKnown RBP19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 PPM1HQ9ULR3 514 aa19.61■□□□□ 0.73
CTDSP2-204ENST00000548823 A0A0J9YYE9 177 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 A0A1W2PQU0 124 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 ENO4A6NNW6 628 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 C1QTNF3-AMACRE9PGA6 284 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 MYO1CO00159 1063 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 CCL22O00626 93 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 PLD2O14939 933 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 BUD23O43709 281 aaKnown RBP19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 UBOX5O94941 541 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 TRBC1P01850 177 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 RBP1P09455 135 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 SBK3P0C264 359 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 SAT1P21673 171 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 ABL2P42684 1182 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 PDX1P52945 283 aa19.6■□□□□ 0.73
CTDSP2-204ENST00000548823 ABCE1P61221 599 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms