RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZDHHC12Q96GR4 267 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 PANX3Q96QZ0 392 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 MVB12BQ9H7P6 319 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 C20orf96Q9NUD7 363 aaPredicted RBP18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 CDYLQ9Y232 598 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 CRYL1Q9Y2S2 319 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 SNX24Q9Y343 169 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 LAMA5O15230 3695 aa18.24■□□□□ 0.51
PRPF40B-206ENST00000547764 OR5K3A6NET4 321 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 FAM187AA6NFU0 413 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 EFCAB7A8K855 629 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 NVLO15381 856 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 RAD51CO43502 376 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 KIF1CO43896 1103 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 PRAMEF10O60809 474 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 GPC4O75487 556 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 S1PR4O95977 384 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 APOA4P06727 396 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ANKRD34CP0C6C1 535 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ADARP55265 1226 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 PRKG2Q13237 762 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 CTBP1Q13363 440 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 CRYMQ14894 314 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF789Q5FWF6 425 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 FAM92BQ6ZTR7 304 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 MAATS1Q7Z4T9 603 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 FAM129CQ86XR2 697 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 VRK3Q8IV63 474 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 DENND6AQ8IWF6 608 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 SLC22A15Q8IZD6 547 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 UNC5BQ8IZJ1 945 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF248Q8NDW4 579 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 OR4E2Q8NGC2 313 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ASZ1Q8WWH4 475 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 NAF1Q96HR8 494 aaKnown RBP18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 HRASLS2Q9NWW9 162 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 ASF1AQ9Y294 204 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 PKD1L2Q7Z442 2459 aa18.23■□□□□ 0.51
PRPF40B-206ENST00000547764 OR6C74A6NCV1 312 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 B4E171 279 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 C9orf172C9J069 976 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 TOX3O15405 576 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 RRP8O43159 456 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 RASSF9O75901 435 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 TTC4O95801 387 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 ESR1P03372 595 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 F7P08709 466 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 TSPAN7P41732 249 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 HIF1AQ16665 826 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 HP1BP3Q5SSJ5 553 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 CACHD1Q5VU97 1274 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF572Q7Z3I7 529 aaPredicted RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 PRSS42Q7Z5A4 293 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 OOSP2Q86WS3 158 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 LMNTD2Q8IXW0 634 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 BMPERQ8N8U9 685 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 OR52E1Q8NGJ3 308 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 OR5AR1Q8NGP9 310 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 LCN9Q8WX39 176 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 ART4Q93070 314 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 TAAR9Q96RI9 348 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 NRTNQ99748 197 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 ERP44Q9BS26 406 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 NAT9Q9BTE0 207 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 HGH1Q9BTY7 390 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF768Q9H5H4 540 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 TFB2MQ9H5Q4 396 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 INTS10Q9NVR2 710 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 SLC39A1Q9NY26 324 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 FOXJ2Q9P0K8 574 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 CDC23Q9UJX2 597 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 VPS9D1Q9Y2B5 631 aa18.22■□□□□ 0.51
PRPF40B-206ENST00000547764 H3BMM5 538 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 NIPSNAP2O75323 286 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 URI1O94763 535 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 SLCO2B1O94956 709 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 ITPKBP27987 946 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 ELK3P41970 407 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 SLC1A2P43004 574 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 SEPHS1P49903 392 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 ARL4CP56559 192 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 TMED2Q15363 201 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 HSP90AA5PQ58FG0 334 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 SPANXN3Q5MJ09 141 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 TMEM164Q5U3C3 297 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 LRRC69Q6ZNQ3 347 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 OTOAQ7RTW8 1153 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 KCNMB4Q86W47 210 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 TBC1D21Q8IYX1 336 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 CALML6Q8TD86 181 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 HNRNPLLQ8WVV9 542 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 PMEPA1Q969W9 287 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 WDR83Q9BRX9 315 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 B3GNT4Q9C0J1 378 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 DPH5Q9H2P9 285 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 TRIT1Q9H3H1 467 aaKnown RBP18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 SRMSQ9H3Y6 488 aa18.21■□□□□ 0.51
PRPF40B-206ENST00000547764 FBXO6Q9NRD1 293 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms