RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 NR1D2Q14995 579 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 CLPPQ16740 277 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-213ENST00000546820 PERM1Q5SV97 790 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 NEK10Q6ZWH5 1172 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 CNPY4Q8N129 248 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 SIDT2Q8NBJ9 832 aaKnown RBP13.44□□□□□ -0.26
PTCH1-213ENST00000546820 PHC3Q8NDX5 983 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 OR10G6Q8NH81 332 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 MAGEC3Q8TD91 643 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 TSPAN17Q96FV3 270 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 ATXN7L3BQ96GX2 97 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 GPR21Q99679 349 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 RBBP8Q99708 897 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 PARD6BQ9BYG5 372 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 TRIT1Q9H3H1 467 aaKnown RBP13.44□□□□□ -0.26
PTCH1-213ENST00000546820 EPB41L1Q9H4G0 881 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 TOR4AQ9NXH8 423 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 CDYLQ9Y232 598 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
PTCH1-213ENST00000546820 CEP250Q9BV73 2442 aa13.44□□□□□ -0.26
PTCH1-213ENST00000546820 FAM95CA0A1B0GW59 222 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 LILRA5A6NI73 299 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 RIPK2O43353 540 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 PIAS1O75925 651 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 C1QAP02745 245 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 MYBL2P10244 700 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 AMD1P17707 334 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 MSH2P43246 934 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 ABCG1P45844 678 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 OR1D5P58170 312 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 IL2P60568 153 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 UAP1Q16222 522 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 RBM20Q5T481 1227 aaKnown RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 LGSNQ5TDP6 509 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 KLHL35Q6PF15 583 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 XKR5Q6UX68 686 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 UNC5DQ6UXZ4 953 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 TAOK1Q7L7X3 1001 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 SPRED1Q7Z699 444 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 GSPT2Q8IYD1 628 aaKnown RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 ACVR1CQ8NER5 493 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 UBLCP1Q8WVY7 318 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 MRRFQ96E11 262 aaKnown RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 GFM1Q96RP9 751 aaKnown RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 DPYSL5Q9BPU6 564 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 LRRN3Q9H3W5 708 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 SYTL2Q9HCH5 934 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 GALPQ9UBC7 116 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 SLC39A10Q9ULF5 831 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 MED16Q9Y2X0 877 aa13.43□□□□□ -0.26
PTCH1-213ENST00000546820 MTO1Q9Y2Z2 717 aaKnown RBP13.43□□□□□ -0.26
PTCH1-213ENST00000546820 POC1B-GALNT4F8VUJ3 575 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 B4GAT1O43505 415 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 TCEA3O75764 348 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 DKK1O94907 266 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 RPLP0P05388 317 aaKnown RBP13.42□□□□□ -0.26
PTCH1-213ENST00000546820 INHBAP08476 426 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 MPC1LP0DKB6 136 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 CCNFP41002 786 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 SERPINB9P50453 376 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 LIMK2P53671 638 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 CDKN2DP55273 166 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 CCL7P80098 99 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 SPIDRQ14159 915 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 GPR18Q14330 331 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 SLC29A2Q14542 456 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 GBX1Q14549 363 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 USP10Q14694 798 aaKnown RBP13.42□□□□□ -0.26
PTCH1-213ENST00000546820 PLCL1Q15111 1095 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 AMZ1Q400G9 498 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 ACSBG2Q5FVE4 666 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 DHRS13Q6UX07 377 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 PIM3Q86V86 326 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 TMPRSS12Q86WS5 348 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 VRK3Q8IV63 474 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 GALNT15Q8N3T1 639 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 OR5K2Q8NHB8 316 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 UHMK1Q8TAS1 419 aaKnown RBP13.42□□□□□ -0.26
PTCH1-213ENST00000546820 CD200R1Q8TD46 325 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 ADAMTS14Q8WXS8 1223 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 MCMBPQ9BTE3 642 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 KIR3DX1Q9H7L2 352 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 SYNDIG1Q9H7V2 258 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 POPDC3Q9HBV1 291 aa13.42□□□□□ -0.26
PTCH1-213ENST00000546820 IGHV1OR21-1A0A087WYE8 117 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 EXOC1LA0A1B0GW35 172 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 DUX1O43812 170 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 UBXN7O94888 489 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 MATN4O95460 622 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 CPNE6O95741 557 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 JUPP14923 745 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 STMN1P16949 149 aa13.41□□□□□ -0.26
PTCH1-213ENST00000546820 FDXRP22570 491 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms