RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 C11orf63Q6NUN7 778 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CDHR3Q6ZTQ4 885 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PID1Q7Z2X4 250 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ACVR1CQ8NER5 493 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 OR4E2Q8NGC2 313 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 SSC4DQ8WTU2 575 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CPT1BQ92523 772 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 P3H4Q92791 437 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 INPP5DQ92835 1189 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TRAPPC9Q96Q05 1148 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TFB2MQ9H5Q4 396 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ASB8Q9H765 288 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ARNT2Q9HBZ2 717 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ACSS2Q9NR19 701 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CCDC88CQ9P219 2028 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 FBN2P35556 2912 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 TMEM150CB9EJG8 249 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 H7C0S8 307 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 MATN2O00339 956 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 CCL22O00626 93 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 PJA2O43164 708 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 VPS4BO75351 444 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 PSMA3P25788 255 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 NDUFS1P28331 727 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 PTPN7P35236 360 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 GEMP55040 296 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 C4orf17Q53FE4 359 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 FHL5Q5TD97 284 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 KCTD11Q693B1 232 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 MRGPREQ86SM8 312 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 TCTN2Q96GX1 697 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 BARD1Q99728 777 aaKnown RBP12.17□□□□□ -0.46
COPS7A-221ENST00000546229 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 FSD1LQ9BXM9 530 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 ACTR5Q9H9F9 607 aaPredicted RBP12.17□□□□□ -0.46
COPS7A-221ENST00000546229 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 FAM60AQ9NP50 221 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 CUEDC1Q9NWM3 386 aaPredicted RBP12.17□□□□□ -0.46
COPS7A-221ENST00000546229 LUZP4Q9P127 313 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 VPS4AQ9UN37 437 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 SNX7Q9UNH6 387 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 ICKQ9UPZ9 632 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 ZNF451Q9Y4E5 1061 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 POLEQ07864 2286 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 AKAP9Q99996 3911 aa12.17□□□□□ -0.46
COPS7A-221ENST00000546229 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 C5orf60A6NFR6 353 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 AGFG2O95081 481 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ZRANB2O95218 330 aaKnown RBP eCLIP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CLDN1O95832 211 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 POLBP06746 335 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ITGAXP20702 1163 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CDH3P22223 829 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 PEBP1P30086 187 aaKnown RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CTNNA1P35221 906 aaKnown RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CD151P48509 253 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ARL4DP49703 201 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 PDE1BQ01064 536 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ANKRD20A2Q5SQ80 823 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 TMTC4Q5T4D3 741 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ANKRD20A1Q5TYW2 823 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ANKRD20A3Q5VUR7 823 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 SNX20Q7Z614 316 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 PIANPQ8IYJ0 282 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CFAP206Q8IYR0 622 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 TMEM102Q8N9M5 508 aaPredicted RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 ACTL9Q8TC94 416 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
COPS7A-221ENST00000546229 GBP5Q96PP8 586 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 CHRNA10Q9GZZ6 450 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 FAM96AQ9H5X1 160 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 HEBP2Q9Y5Z4 205 aa12.16□□□□□ -0.46
COPS7A-221ENST00000546229 RCCD1A6NED2 376 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 C2orf81A6NN90 581 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 DPM1O60762 260 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ANXA9O76027 345 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 LDLRP01130 860 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 KLK3P07288 261 aaPredicted RBP12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ACRV1P26436 265 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 ACADLP28330 430 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 PREPP48147 710 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 FOXL2P58012 376 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 SPESP1Q6UW49 350 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 MED25Q71SY5 747 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 TRIM73Q86UV7 250 aa12.15□□□□□ -0.46
COPS7A-221ENST00000546229 TC2NQ8N9U0 490 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms