RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SCO1O75880 301 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 COL6A1P12109 1028 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ARF4P18085 180 aaPredicted RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 SLC26A3P40879 764 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 SNRPD2P62316 118 aaKnown RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 FKBP1AP62942 108 aaKnown RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 SPATS1Q496A3 300 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 CDYL2Q8N8U2 506 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 AFG1LQ8WV93 481 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ZNF583Q96ND8 569 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ACAD9Q9H845 621 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 POLR3BQ9NW08 1133 aaPredicted RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 MARCH4Q9P2E8 410 aaPredicted RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 AGO1Q9UL18 857 aaKnown RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 KLHL20Q9Y2M5 609 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ARVCFO00192 962 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 B3GALNT1O75752 331 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 BEST1O76090 585 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 HOXD8P13378 290 aaPredicted RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 ACVR2AP27037 513 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 RRM2P31350 389 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 CTSKP43235 329 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ZFP36L2P47974 494 aaKnown RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 SYCE2Q6PIF2 218 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 DLEU7Q6UYE1 221 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 PROKR1Q8TCW9 393 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 TRNT1Q96Q11 434 aaKnown RBP12.46□□□□□ -0.41
SMG8-202ENST00000543872 VAT1Q99536 393 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 AIFM2Q9BRQ8 373 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ITPAQ9BY32 194 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 ROGDIQ9GZN7 287 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 AKT3Q9Y243 479 aa12.46□□□□□ -0.41
SMG8-202ENST00000543872 A0A0X1KG70 313 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 ANXA9O76027 345 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 VTNP04004 478 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 CYP2A7P20853 494 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 GRIK1P39086 918 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 AGTR2P50052 363 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.42
SMG8-202ENST00000543872 PHACTR4Q8IZ21 702 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 C8orf37Q96NL8 207 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 CDK15Q96Q40 435 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 GLOD4Q9HC38 313 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.42
SMG8-202ENST00000543872 VAPAQ9P0L0 249 aa12.46□□□□□ -0.42
SMG8-202ENST00000543872 NUP214P35658 2090 aaPredicted RBP12.46□□□□□ -0.42
SMG8-202ENST00000543872 FAM234BA2RU67 622 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 OR6C70A6NIJ9 312 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 PSMD3O43242 534 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 KCNJ13O60928 360 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 CBLP22681 906 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 GRK5P34947 590 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 HMGCS2P54868 508 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 FCHO2Q0JRZ9 810 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 GBX1Q14549 363 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 TIGD6Q17RP2 521 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 ZNF484Q5JVG2 852 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 UBA2Q9UBT2 640 aaPredicted RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 RAPGEFL1Q9UHV5 662 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 DNMT3LQ9UJW3 386 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 KCTD3Q9Y597 815 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 IGKV6D-21A0A0A0MT36 114 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 A0A0G2JMP0 313 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 YES1P07947 543 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 BMP1P13497 986 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 M6PRP20645 277 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 LCP2Q13094 533 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 STARD3Q14849 445 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 ANKS6Q68DC2 871 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 TTC29Q8NA56 475 aaPredicted RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 MKRN2Q9H000 416 aaKnown RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 SLA2Q9H6Q3 261 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 TREX1Q9NSU2 369 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 PRMT7Q9NVM4 692 aaPredicted RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 VNN3Q9NY84 501 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 GALPQ9UBC7 116 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
SMG8-202ENST00000543872 MEIOCA2RUB1 952 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 OR2A25A4D2G3 310 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 CXCR6O00574 342 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 SLC16A6O15403 523 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 ZNF682O95780 498 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 G6PDP11413 515 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 KRT20P35900 424 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 ARSDP51689 593 aa12.45□□□□□ -0.42
SMG8-202ENST00000543872 C19orf57Q0VDD7 668 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms