RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 PTPRRQ15256 657 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 FKBP9P1Q75LS8 142 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 R3HCC1LQ7Z5L2 792 aaKnown RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 DENND1CQ8IV53 801 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 ZC3H7AQ8IWR0 971 aaKnown RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 ZNF548Q8NEK5 533 aaPredicted RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 DDHD1Q8NEL9 900 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 OR10A6Q8NH74 314 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 FBXO30Q8TB52 745 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 HDAC2Q92769 488 aaKnown RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 TANKQ92844 425 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 ITFG2Q969R8 447 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 MAGED4Q96JG8 741 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 THUMPD3Q9BV44 507 aaKnown RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 TMEM39AQ9NV64 488 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 EIF3LQ9Y262 564 aaKnown RBP16.29■□□□□ 0.2
KDM2B-216ENST00000543025 PKP3Q9Y446 797 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 SLC30A1Q9Y6M5 507 aa16.29■□□□□ 0.2
KDM2B-216ENST00000543025 SLC38A8A6NNN8 435 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SLC2A4P14672 509 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 GSTM2P28161 218 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 FAM189BP81408 668 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 MAD2L1Q13257 205 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 PTGR1Q14914 329 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SKIV2LQ15477 1246 aaKnown RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 MAPKAPK3Q16644 382 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 COL13A1Q5TAT6 717 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ENPP6Q6UWR7 440 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 RSPO2Q6UXX9 243 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ZNF555Q8NEP9 628 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SNX19Q92543 992 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SCLYQ96I15 445 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 PLEKHA8Q96JA3 519 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 FEM1AQ9BSK4 669 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 OSBPL10Q9BXB5 764 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 CARS2Q9HA77 564 aaKnown RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 FAM118AQ9NWS6 357 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ADGRE2Q9UHX3 823 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 CCL27Q9Y4X3 112 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 TET1Q8NFU7 2136 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 A0A0U1RQS6 177 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 RGS14O43566 566 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 BCL10O95999 233 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ZNF12P17014 697 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 MAPK10P53779 464 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 TPD52P55327 224 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 CCL23P55773 120 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 CYP4F3Q08477 520 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SVOPLQ8N434 492 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 SLC47A1Q96FL8 570 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 LHPPQ9H008 270 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 GPN2Q9H9Y4 310 aaPredicted RBP16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ZMYM5Q9UJ78 669 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 ZNF510Q9Y2H8 683 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 PCDHGA8Q9Y5G5 932 aa16.28■□□□□ 0.2
KDM2B-216ENST00000543025 A0A1B0GVM2 712 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 TFPTP0C1Z6 253 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 HSPA7P48741 367 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 SGSHP51688 502 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 PPP2R2BQ00005 443 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 TWF1Q12792 350 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 FAM174BQ3ZCQ3 159 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 GALNT13Q8IUC8 556 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 GLB1L3Q8NCI6 653 aaPredicted RBP16.27■□□□□ 0.2
KDM2B-216ENST00000543025 BPIFB6Q8NFQ5 453 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 SLC22A17Q8WUG5 538 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 RBM4BQ9BQ04 359 aaKnown RBP16.27■□□□□ 0.2
KDM2B-216ENST00000543025 RBM4Q9BWF3 364 aaKnown RBP16.27■□□□□ 0.2
KDM2B-216ENST00000543025 NSUN3Q9H649 340 aaKnown RBP16.27■□□□□ 0.2
KDM2B-216ENST00000543025 PALMDQ9NP74 551 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 IL17CQ9P0M4 197 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 BLOC1S6Q9UL45 172 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 ELOVL7A1L3X0 281 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 GNGT2O14610 69 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 GUCA1CO95843 209 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 IL7RP16871 459 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 ATF6P18850 670 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 IST1P53990 364 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 ARF5P84085 180 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 SMU1Q2TAY7 513 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 PLA2G4EQ3MJ16 856 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 PTRHD1Q6GMV3 140 aaKnown RBP16.27■□□□□ 0.2
KDM2B-216ENST00000543025 C16orf87Q6PH81 154 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 NCEH1Q6PIU2 408 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 CERS6Q6ZMG9 384 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 CHST9Q7L1S5 443 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 SPARTQ8N0X7 666 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 PJA1Q8NG27 643 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 OR52E4Q8NGH9 312 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 COX4I2Q96KJ9 171 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 SH3GL1Q99961 368 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 TTLL2Q9BWV7 592 aa16.27■□□□□ 0.2
KDM2B-216ENST00000543025 CIPCQ9C0C6 399 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms