RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PCDHGA10Q9Y5H3 936 aa12.92□□□□□ -0.34
TNC-212ENST00000542877 PRODHO43272 600 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 SNX4O95219 450 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 C8BP07358 591 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 GIMD1P0DJR0 217 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 RORCP51449 518 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 ARF5P84085 180 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 MXD1Q05195 221 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 PLEKHG6Q3KR16 790 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 NAT16Q8N8M0 369 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 TMEM209Q96SK2 561 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 TNKS2Q9H2K2 1166 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 LGR5O75473 907 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 CXCL14O95715 111 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 YAP1P46937 504 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 TSEN15Q8WW01 171 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 RNF31Q96EP0 1072 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 HAPLN3Q96S86 360 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 KCNS3Q9BQ31 491 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNC-212ENST00000542877 RBM7Q9Y580 266 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 NFAT5O94916 1531 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 HCN1O60741 890 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 ADNP2Q6IQ32 1131 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 DUSP26Q9BV47 211 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 FZD8Q9H461 694 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 COLEC10Q9Y6Z7 277 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 OR2AG2A6NM03 316 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 K7EPI3 171 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 NOS1APO75052 506 aaPredicted RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 STBD1O95210 358 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 CMPK1P30085 196 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 TPTEP56180 551 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 FKBP1BP68106 108 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 RFTN1Q14699 578 aaPredicted RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 CRTC2Q53ET0 693 aaPredicted RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 STX12Q86Y82 276 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 TNFAIP8L1Q8WVP5 186 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
TNC-212ENST00000542877 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
TNC-212ENST00000542877 TREHO43280 583 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 CYP11A1P05108 521 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 POU2F1P14859 743 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 DNAJB1P25685 340 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 IGFALSP35858 605 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 NADK2Q4G0N4 442 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 IQCCQ4KMZ1 466 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 FRRS1Q6ZNA5 592 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PRR23BQ6ZRT6 265 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 CFAP206Q8IYR0 622 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 MNTQ99583 582 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PCBD2Q9H0N5 130 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TMEM165Q9HC07 324 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 UPB1Q9UBR1 384 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 ITM2AO43736 263 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 LAG3P18627 525 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 GNAZP19086 355 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 CBX5P45973 191 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 FOXM1Q08050 763 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 ZNF155Q12901 538 aaPredicted RBP12.9□□□□□ -0.34
TNC-212ENST00000542877 KLHDC10Q6PID8 442 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 LRRC58Q96CX6 371 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 DEC1Q9P2X7 70 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 GRIP1Q9Y3R0 1128 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3DA0A087WVF3 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3IA0A087WXS9 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3EA0A087X179 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3KA0A087X1G2 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 MYBPHLA2RUH7 354 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3FA6NER0 549 aaPredicted RBP12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3LB9A6J9 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 SEMA3DO95025 777 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3HP0C7X1 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 AOC1P19801 751 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 NT5EP21589 574 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PITPNAQ00169 270 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 NDUFA9Q16795 377 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3GQ6DHY5 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3CQ6IPX1 549 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBC1D3Q8IZP1 549 aaPredicted RBP12.9□□□□□ -0.34
TNC-212ENST00000542877 TRIM2Q9C040 744 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 ZNF224Q9NZL3 707 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PTPRJQ12913 1337 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PRAMEF33A0A0G2JMD5 474 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 YJEFN3A6XGL0 299 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 TBX1O43435 398 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 PRAMEF10O60809 474 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
TNC-212ENST00000542877 CD36P16671 472 aa12.9□□□□□ -0.34
TNC-212ENST00000542877 SP3Q02447 781 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms