RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 UROC1Q96N76 676 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 PPP1R2P1Q96PQ5 205 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 TMEM248Q9NWD8 314 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 VPS51Q9UID3 782 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 MTMR11A4FU01 709 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 TMEM221A6NGB7 291 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 C2orf81A6NN90 581 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 C16orf96A6NNT2 1141 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 ENO2P09104 434 aaPredicted RBP15.07■□□□□ 0
CNOT9-208ENST00000542068 UMPSP11172 480 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 HTR1EP28566 365 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 MC4RP32245 332 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 TRIP4Q15650 581 aaPredicted RBP15.07■□□□□ 0
CNOT9-208ENST00000542068 DPY19L1Q2PZI1 675 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 RNF219Q5W0B1 726 aaPredicted RBP15.07■□□□□ 0
CNOT9-208ENST00000542068 DSG4Q86SJ6 1040 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 ADCK1Q86TW2 530 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 BRSK1Q8TDC3 778 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 CHPT1Q8WUD6 406 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 NODALQ96S42 347 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 RASSF1Q9NS23 344 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 HACD3Q9P035 362 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 MTRRQ9UBK8 725 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 MAGEL2Q9UJ55 1249 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 GNPTGQ9UJJ9 305 aa15.07■□□□□ 0
CNOT9-208ENST00000542068 NYNRINQ9P2P1 1898 aaKnown RBP15.07■□□□□ 0
CNOT9-208ENST00000542068 SULT1C4O75897 302 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 ZNF682O95780 498 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 MYCLP1P12525 358 aaPredicted RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 PFKLP17858 780 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 SLC6A4P31645 630 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 HPCAL1P37235 193 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 SLC11A1P49279 550 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 SLC11A2P49281 568 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 GSTM4Q03013 218 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 NADSYN1Q6IA69 706 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 FUT10Q6P4F1 479 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 DLEU7Q6UYE1 221 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 PTRH1Q86Y79 214 aaKnown RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 TRUB1Q8WWH5 349 aaKnown RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 SH3YL1Q96HL8 342 aaPredicted RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 TDRD1Q9BXT4 1180 aaKnown RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 ERVK-18Q9QC07 812 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 ZNF229Q9UJW7 825 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 ANGPTL3Q9Y5C1 460 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 KIAA0100Q14667 2235 aaKnown RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 CLDN25C9JDP6 229 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 VPS26AO75436 327 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 HOXC13P31276 330 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 FOXM1Q08050 763 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 CRY1Q16526 586 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 ZFAND4Q86XD8 727 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 SLC22A15Q8IZD6 547 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 OR7A2PQ8NGA2 310 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 OR4F6Q8NGB9 312 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 AUTS2Q8WXX7 1259 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 ALOXE3Q9BYJ1 711 aa15.06■□□□□ 0
CNOT9-208ENST00000542068 PAK1IP1Q9NWT1 392 aaPredicted RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 FCF1Q9Y324 198 aaKnown RBP15.06■□□□□ 0
CNOT9-208ENST00000542068 VPS4BO75351 444 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 CPNE6O95741 557 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 FADS2O95864 444 aaKnown RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 RPS17P08708 135 aaKnown RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 ALPIP09923 528 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 CORO1AP31146 461 aaKnown RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 IL2P60568 153 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 CAP1Q01518 475 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 IL10RBQ08334 325 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 DSC3Q14574 896 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 INAQ16352 499 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 SMN1Q16637 294 aaKnown RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 SPANXN4Q5MJ08 99 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 NIPAL1Q6NVV3 410 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 RIMKLAQ8IXN7 391 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 CLDN19Q8N6F1 224 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 ZNF513Q8N8E2 541 aaPredicted RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 PDPRQ8NCN5 879 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 RHEBL1Q8TAI7 183 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 HTRA1Q92743 480 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 SLC39A13Q96H72 371 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 NSMCE3Q96MG7 304 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 MBOAT4Q96T53 435 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 KLQ9UEF7 1012 aa15.05■□□□□ 0
CNOT9-208ENST00000542068 AGO1Q9UL18 857 aaKnown RBP15.05■□□□□ 0
CNOT9-208ENST00000542068 LOC285095A0A1B0GVY8 99 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 UPK3BL1B0FP48 263 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 UPK3BL2E5RIL1 263 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 AOC2O75106 756 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 LRATO95237 230 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 SGSHP51688 502 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 NCS1P62166 190 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 SKIV2LQ15477 1246 aaKnown RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 MAPKAPK3Q16644 382 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 ARTNQ5T4W7 220 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 TTC23Q5W5X9 447 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 AFMIDQ63HM1 303 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 FAM151BQ6UXP7 276 aa15.05■□□□□ -0
CNOT9-208ENST00000542068 ZCCHC7Q8N3Z6 543 aaKnown RBP15.05■□□□□ -0
CNOT9-208ENST00000542068 MDGA1Q8NFP4 955 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms