RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TBC1D3HP0C7X1 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 C7P10643 843 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 CHRNB1P11230 501 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 NCF1P14598 390 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 ATXN3P54252 364 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TGFBIQ15582 683 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 UNC50Q53HI1 259 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ZNF678Q5SXM1 525 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 VWA5B1Q5TIE3 1220 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3GQ6DHY5 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3CQ6IPX1 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 SBSNQ6UWP8 590 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 CYHR1Q6ZMK1 362 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ADGRG6Q86SQ4 1221 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3Q8IZP1 549 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 ASZ1Q8WWH4 475 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 THTPAQ9BU02 230 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 C1QTNF2Q9BXJ5 285 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 FAM126AQ9BYI3 521 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 MMADHCQ9H3L0 296 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 EPHX3Q9H6B9 360 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TNFRSF12AQ9NP84 129 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 CD274Q9NZQ7 290 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TMCO1Q9UM00 188 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 SORCS3Q9UPU3 1222 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 NUAK1O60285 661 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 RNGTTO60942 597 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 DCTN3O75935 186 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 SUPT7LO94864 414 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 HNRNPCP07910 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
THBS3-210ENST00000541576 TSPAN8P19075 237 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 PGM1P36871 562 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 GBX1Q14549 363 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 IRGCQ6NXR0 463 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 HEATR4Q86WZ0 1026 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 HORMAD1Q86X24 394 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 FLCNQ8NFG4 579 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 MAPK15Q8TD08 544 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 SKA2Q8WVK7 121 aaPredicted RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 KLK6Q92876 244 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 CCM2Q9BSQ5 444 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 GSTO2Q9H4Y5 243 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 DNAAF2Q9NVR5 837 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 NUDT4Q9NZJ9 180 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ATXN10Q9UBB4 475 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 PPP6CO00743 305 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 UBFD1O14562 309 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 MAGEB3O15480 346 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 VEGFDO43915 354 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 KLK8O60259 260 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 PSMG1O95456 288 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ACADSP16219 412 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 GABRG2P18507 467 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ALDH18A1P54886 795 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 CDH13P55290 713 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 CDK3Q00526 305 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ZP2Q05996 745 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 FGL2Q14314 439 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 LRRC32Q14392 662 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 IRF4Q15306 451 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 PPP1R3AQ16821 1122 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 BCL7AQ4VC05 210 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 SYTL3Q4VX76 610 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 HABP4Q5JVS0 413 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 NEK5Q6P3R8 708 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 RINLQ6ZS11 566 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ALYREFQ86V81 257 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 TRAPPC5Q8IUR0 188 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 SYNPOQ8N3V7 929 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 HMGB4Q8WW32 186 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 DLG3Q92796 817 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 COX14Q96I36 57 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 MPP4Q96JB8 637 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ZNF514Q96K75 400 aaPredicted RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 TRMOQ9BU70 441 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 C1QTNF7Q9BXJ2 289 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 SLC17A9Q9BYT1 436 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 LMAN1LQ9HAT1 526 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 MBNL1Q9NR56 388 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 ADAMTS6Q9UKP5 1117 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 FBXL21Q9UKT6 434 aa8.51□□□□□ -1.05
THBS3-210ENST00000541576 MRPS17Q9Y2R5 130 aaKnown RBP8.51□□□□□ -1.05
THBS3-210ENST00000541576 COL6A3P12111 3177 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 MYOCOSA0A1B0GUC4 107 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 TMEM202A6NGA9 273 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 B2RBV5 119 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 TMEM233B4DJY2 109 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 STX16-NPEPL1H3BU86 382 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 STX16O14662 325 aa8.5□□□□□ -1.05
THBS3-210ENST00000541576 RAD51BO15315 384 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms