RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 RPL21P46778 160 aaKnown RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ARL4CP56559 192 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 PPP1CAP62136 330 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CKAP4Q07065 602 aaKnown RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CTBP1Q13363 440 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CRYMQ14894 314 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 TMED2Q15363 201 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 HIF1AQ16665 826 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF789Q5FWF6 425 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CTSL3PQ5NE16 218 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CENPUQ71F23 418 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 OTOAQ7RTW8 1153 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ARHGAP22Q7Z5H3 698 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 OOSP2Q86WS3 158 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 VRK3Q8IV63 474 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 IGDCC3Q8IVU1 814 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 DENND6AQ8IWF6 608 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 UNC5BQ8IZJ1 945 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ACVR1CQ8NER5 493 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 OR4E2Q8NGC2 313 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 OR5AR1Q8NGP9 310 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 SNIP1Q8TAD8 396 aaKnown RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 GSDMBQ8TAX9 411 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ASZ1Q8WWH4 475 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 LCN9Q8WX39 176 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 LPGAT1Q92604 370 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 USP7Q93009 1102 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ART4Q93070 314 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FAM136AQ96C01 138 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CFAP36Q96G28 342 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ZDHHC12Q96GR4 267 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 C9orf72Q96LT7 481 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 BIRC8Q96P09 236 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 PANX3Q96QZ0 392 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 MVB12BQ9H7P6 319 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FBXO6Q9NRD1 293 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 INTS10Q9NVR2 710 aaKnown RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 HRASLS2Q9NWW9 162 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 OCIAD1Q9NX40 245 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CDC23Q9UJX2 597 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CHMP2BQ9UQN3 213 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FAM169AQ9Y6X4 670 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 MN1Q10571 1320 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FREM2Q5SZK8 3169 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 OR5K3A6NET4 321 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 E5RI56 91 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 H3BMM5 538 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 TP73O15350 636 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 RRP8O43159 456 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 KIF1CO43896 1103 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 PRAMEF10O60809 474 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 NIPSNAP2O75323 286 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 GPC4O75487 556 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 S1PR4O95977 384 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ESR1P03372 595 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ERVK-10P10266 1014 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 POLR2CP19387 275 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CHRM3P20309 590 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ACADLP28330 430 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SLC5A2P31639 672 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 EIF2S3P41091 472 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SEPHS1P49903 392 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ADARP55265 1226 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 MPP1Q00013 466 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ABRQ12979 859 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CALCOCO2Q13137 446 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SPANXN3Q5MJ09 141 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 DNTTIP2Q5QJE6 756 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CACHD1Q5VU97 1274 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ARMC6Q6NXE6 501 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF572Q7Z3I7 529 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CLEC14AQ86T13 490 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 KCNMB4Q86W47 210 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ANKMY2Q8IV38 441 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SLC22A15Q8IZD6 547 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF248Q8NDW4 579 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 OR52E1Q8NGJ3 308 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CFAP61Q8NHU2 1237 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 CALML6Q8TD86 181 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SKA2Q8WVK7 121 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 HNRNPLLQ8WVV9 542 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 LRRC39Q96DD0 335 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 NRTNQ99748 197 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 ERP44Q9BS26 406 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 FAM167BQ9BTA0 163 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 NAT9Q9BTE0 207 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
SNHG1-215ENST00000540904 SRMSQ9H3Y6 488 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 XKR8Q9H6D3 395 aa8.98□□□□□ -0.97
SNHG1-215ENST00000540904 PPANQ9NQ55 473 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms