RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 CLDN19Q8N6F1 224 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 OR4E2Q8NGC2 313 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 OR13J1Q8NGT2 312 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 CT55Q8WUE5 264 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 FERD3LQ96RJ6 166 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 TSGA10Q9BZW7 698 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 AKIRIN1Q9H9L7 192 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 KCND1Q9NSA2 647 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 LNPEPQ9UIQ6 1025 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 MED13Q9UHV7 2174 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 FER1L5A0AVI2 2057 aa12.74□□□□□ -0.37
SEMA4D-223ENST00000540475 SLC5A10A0PJK1 596 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 BTN3A3O00478 584 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 PTMAP06454 111 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 POLR2CP19387 275 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 FDFT1P37268 417 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 SIX1Q15475 284 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 TMTC4Q5T4D3 741 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 LYPLAL1Q5VWZ2 237 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 IZUMO3Q5VZ72 239 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ARMC6Q6NXE6 501 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 DRICH1Q6PGQ1 229 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ADGRF3Q8IZF5 1079 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 SLC38A9Q8NBW4 561 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 OR52E1Q8NGJ3 308 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 LCN9Q8WX39 176 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ATG4AQ8WYN0 398 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 SEC14L1Q92503 715 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 TFGQ92734 400 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 PPM1MQ96MI6 270 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 SRMSQ9H3Y6 488 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 CASS4Q9NQ75 786 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 ANAPC2Q9UJX6 822 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 POLHQ9Y253 713 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
SEMA4D-223ENST00000540475 CCDC88CQ9P219 2028 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 HEATR9A2RTY3 570 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 CCDC162PA2VCL2 907 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 SLC9B1P1A6NJY1 282 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 IFRD1O00458 451 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 BTN3A1O00481 513 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 KRT86O43790 486 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 NTRK1P04629 796 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 ADRA1DP25100 572 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 PTPN4P29074 926 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 RORAP35398 523 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 ARL4DP49703 201 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 PLOD1Q02809 727 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 PRKAA1Q13131 559 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 ERV3-1Q14264 604 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 KRT33BQ14525 404 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 GPR19Q15760 415 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 C16orf46Q6P387 395 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 ZNF449Q6P9G9 518 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 TAS2R42Q7RTR8 314 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 AMIGO1Q86WK6 493 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 C9orf43Q8TAL5 461 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 TRAPPC9Q96Q05 1148 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 PIH1D1Q9NWS0 290 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 SMARCAL1Q9NZC9 954 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 FAM8A1Q9UBU6 413 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 ANKRD12Q6UB98 2062 aa12.72□□□□□ -0.37
SEMA4D-223ENST00000540475 BHMG1C9JSJ3 638 aaPredicted RBP12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 H3BMH7 237 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 SCRG1O75711 98 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 FTH1P02794 183 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 TPBGLP0DKB5 382 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 CASRP41180 1078 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 GRIA1P42261 906 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 PREPP48147 710 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 ARCN1P48444 511 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 PMS2P54278 862 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 GSDMDP57764 484 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 GPS2Q13227 327 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 SEPT6Q14141 434 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 CCNG2Q16589 344 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 UGT8Q16880 541 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 CCDC38Q502W7 563 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 PLEKHS1Q5SXH7 462 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 TSTD2Q5T7W7 516 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 SEL1L2Q5TEA6 688 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 FBXO38Q6PIJ6 1188 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 ZNF534Q76KX8 674 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 NLRP9Q7RTR0 991 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 SYVN1Q86TM6 617 aa12.71□□□□□ -0.37
SEMA4D-223ENST00000540475 TBC1D21Q8IYX1 336 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms