RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF517Q6ZMY9 492 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZNF598Q86UK7 904 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 SLC41A1Q8IVJ1 513 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PYROXD2Q8N2H3 581 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 SMRP1Q8NCR6 262 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 KBTBD8Q8NFY9 601 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 FBXO30Q8TB52 745 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 NDNFQ8TB73 568 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 C18orf25Q96B23 403 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 NACC2Q96BF6 587 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 P2RY11Q96G91 374 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 AGAP4Q96P64 663 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 CSPG4P5Q96PW8 444 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 AGAP2Q99490 1192 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 UGT2B28Q9BY64 529 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PRRG3Q9BZD7 231 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 IL22Q9GZX6 179 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 ATP6V1HQ9UI12 483 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 HOXC11O43248 304 aaPredicted RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 GRID2O43424 1007 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 AIREO43918 545 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 UGT2B11O75310 529 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 STBD1O95210 358 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CST1P01037 141 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CD36P16671 472 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ALDH3A2P51648 485 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 RACK1P63244 317 aaKnown RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 CREB5Q02930 508 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ITKQ08881 620 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 GTF2H3Q13889 308 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ZNF852Q6ZMS4 543 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ARHGAP36Q6ZRI8 547 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 TFAP2DQ7Z6R9 452 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CUZD1Q86UP6 607 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 OR5H6Q8NGV6 325 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 RHOXF1Q8NHV9 184 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 GANCQ8TET4 914 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 EDAQ92838 391 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SLA2Q9H6Q3 261 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 AGPAT4Q9NRZ5 378 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 AFF4Q9UHB7 1163 aaKnown RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
DDB1-217ENST00000540166 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 EVPLQ92817 2033 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 HNRNPCL2B2RXH8 293 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 C2CD4DB7Z1M9 353 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SDHDO14521 159 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 MTRF1O75570 445 aaKnown RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 FTH1P02794 183 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 HTR1BP28222 390 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 RAB14P61106 215 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 NCS1P62166 190 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 C5orf22Q49AR2 442 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 RAP1GAP2Q684P5 730 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 LCLAT1Q6UWP7 414 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 DEFB106AQ8N104 65 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 TANKQ92844 425 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 LGALS12Q96DT0 336 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 THUMPD3Q9BV44 507 aaKnown RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 PAK1IP1Q9NWT1 392 aaPredicted RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 MIOSQ9NXC5 875 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 PCDHB3Q9Y5E6 796 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 OR6C70A6NIJ9 312 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 E5RI56 91 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 NOBOXO60393 691 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 LRIG2O94898 1065 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CXCR2P25025 360 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SLC15A1P46059 708 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CD83Q01151 205 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 GRM3Q14832 879 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 FAM187BQ17R55 369 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 CYBRD1Q53TN4 286 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SLX4IPQ5VYV7 408 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ZNF470Q6ECI4 717 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 GLYATQ6IB77 296 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 FAM45BPQ6NSW5 357 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ERAP2Q6P179 960 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SYCE2Q6PIF2 218 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ATAD1Q8NBU5 361 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 ENKURQ8TC29 256 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 FAM45AQ8TCE6 357 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 RNF139Q8WU17 664 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SLCO4A1Q96BD0 722 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 SIK2Q9H0K1 926 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 MMP27Q9H306 513 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 IL37Q9NZH6 218 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 DTLQ9NZJ0 730 aa8.55□□□□□ -1.04
DDB1-217ENST00000540166 EIF3LQ9Y262 564 aaKnown RBP8.55□□□□□ -1.04
DDB1-217ENST00000540166 FAM170BA6NMN3 283 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 G3V2L1 256 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 RGS13O14921 159 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 RGS10O43665 173 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 CPNE6O95741 557 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 RHOP08100 348 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 ARRB2P32121 409 aa8.54□□□□□ -1.04
DDB1-217ENST00000540166 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms