RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 N4BP2L1Q5TBK1 243 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 LRRC8EQ6NSJ5 796 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SLC30A9Q6PML9 568 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 NEK10Q6ZWH5 1172 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RABEPKQ7Z6M1 372 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 LCA5Q86VQ0 697 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TCP10LQ8TDR4 215 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PTERQ96BW5 349 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TSNARE1Q96NA8 513 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 NMRAL1Q9HBL8 299 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 KCNK9Q9NPC2 374 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RXFP3Q9NSD7 469 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TBC1D29Q9UFV1 150 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ACSL5Q9ULC5 683 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 WDR37Q9Y2I8 494 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CACNA1EQ15878 2313 aa18.5■□□□□ 0.55
TNFRSF1A-213ENST00000540022 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 BTN3A1O00481 513 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PRPF4O43172 522 aaKnown RBP eCLIP18.49■□□□□ 0.555e-7■■■■□ 24.8
TNFRSF1A-213ENST00000540022 FOXD2O60548 495 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SNX2O60749 519 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RPA3P35244 121 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ATP6V0D1P61421 351 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 HNRNPKP61978 463 aaKnown RBP eCLIP18.49■□□□□ 0.557e-7■■■□□ 16.2
TNFRSF1A-213ENST00000540022 ABRQ12979 859 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GRIK2Q13002 908 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ACAP2Q15057 778 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SLC23A3Q6PIS1 610 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ISCA2Q86U28 154 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 FSTL5Q8N475 847 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SKA2Q8WVK7 121 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GSDMCQ9BYG8 508 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 WWP1Q9H0M0 922 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PRDM8Q9NQV8 689 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SLC17A7Q9P2U7 560 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 EMCNQ9ULC0 261 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 GRID1Q9ULK0 1009 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SLC6A14Q9UN76 642 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PLLPQ9Y342 182 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ASCC3Q8N3C0 2202 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TMEM120BA0PK00 339 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 NPEPPSL1A6NEC2 478 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 MATN4O95460 622 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 EML2O95834 649 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ACADLP28330 430 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 KCNC1P48547 511 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TSNQ15631 228 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TECRLQ5HYJ1 363 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 LVRNQ6Q4G3 990 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TMEM151AQ8N4L1 468 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 OR2I1PQ8NGU4 316 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 NETO1Q8TDF5 533 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 KIAA1191Q96A73 305 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RMDN2Q96LZ7 410 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ELF4Q99607 663 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SELENOSQ9BQE4 189 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TFB2MQ9H5Q4 396 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ALG9Q9H6U8 611 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SPASTQ9UBP0 616 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ADAMTS6Q9UKP5 1117 aa18.49■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PDZK1P1A8MUH7 402 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SDC3O75056 442 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PIAS2O75928 621 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CLCA4Q14CN2 919 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SHBQ15464 509 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 OR4D1Q15615 310 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CAPRIN2Q6IMN6 1127 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 KLC3Q6P597 504 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ERMP1Q7Z2K6 904 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TAF8Q7Z7C8 310 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PDZD3Q86UT5 571 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RASGRP3Q8IV61 690 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 CFAP61Q8NHU2 1237 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 LMX1AQ8TE12 382 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ASB11Q8WXH4 323 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 DLG3Q92796 817 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SCYL1Q96KG9 808 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ZDHHC5Q9C0B5 715 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 IQCGQ9H095 443 aaKnown RBP18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 FAM53CQ9NYF3 392 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SCHIP1Q9P0W5 487 aaPredicted RBP18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TAAR2Q9P1P5 351 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 XPR1Q9UBH6 696 aa18.48■□□□□ 0.55
TNFRSF1A-213ENST00000540022 A6NCN8 305 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 TK2O00142 265 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PLIN3O60664 434 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PROCP04070 461 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SBK3P0C264 359 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SLC35G4P0C7Q5 338 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 SDHBP21912 280 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 RXRGP48443 463 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 PPP2R2AP63151 447 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 BNIP3Q12983 259 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ELOCQ15369 112 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 ZNF423Q2M1K9 1284 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 HLA-BQ31612 363 aa18.47■□□□□ 0.55
TNFRSF1A-213ENST00000540022 UAP1L1Q3KQV9 507 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms