RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 BTN3A3O00478 584 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TERTO14746 1132 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 OR1I1O60431 355 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 GOT2P00505 430 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 APRTP07741 180 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 CDH3P22223 829 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 CD151P48509 253 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TUBB4BP68371 445 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 RPA4Q13156 261 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 SEMA5AQ13591 1074 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TUBB2AQ13885 445 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ITIH4Q14624 930 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 SIX1Q15475 284 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TSTD2Q5T7W7 516 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 BOD1L1Q8NFC6 3051 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 OR52E1Q8NGJ3 308 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 CT55Q8WUE5 264 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ELMO1Q92556 727 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TFGQ92734 400 aaPredicted RBP18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ZNF778Q96MU6 729 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TUBB2BQ9BVA1 445 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 SLC25A18Q9H1K4 315 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ADNPQ9H2P0 1102 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 MVB12BQ9H7P6 319 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 LHX9Q9NQ69 397 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 CASS4Q9NQ75 786 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 POMT2Q9UKY4 750 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 PADI1Q9ULC6 663 aa18.53■□□□□ 0.56
TNFRSF1A-212ENST00000539372 BTN3A1O00481 513 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 MT-ND3P03897 115 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 CCDC175P0C221 793 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ADRA1DP25100 572 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 RPL22P35268 128 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 ERV3-1Q14264 604 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 KCTD19Q17RG1 926 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 AFTPHQ6ULP2 937 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 PACS1Q6VY07 963 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 UBE2Q2Q8WVN8 375 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 RANBP9Q96S59 729 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 TLR10Q9BXR5 811 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 AKIRIN1Q9H9L7 192 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 PAK5Q9P286 719 aa18.52■□□□□ 0.56
TNFRSF1A-212ENST00000539372 BSNQ9UPA5 3926 aa18.52■□□□□ 0.55
TNFRSF1A-212ENST00000539372 LIN7AO14910 233 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 FTH1P02794 183 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 GSTM1P09488 218 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PRDX3P30048 256 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 GSTM4Q03013 218 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 DNASE1L3Q13609 305 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 LAMB3Q13751 1172 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 BOP1Q14137 746 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 CCNG2Q16589 344 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TMTC4Q5T4D3 741 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PRAMEF17Q5VTA0 474 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 BPHLQ86WA6 291 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 AMIGO1Q86WK6 493 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TMEM126BQ8IUX1 230 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 LRRC8AQ8IWT6 810 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 OR5AR1Q8NGP9 310 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 OR6P1Q8NGX9 317 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ZNF501Q96CX3 271 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 FCRL4Q96PJ5 515 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 RUFY1Q96T51 708 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TRIM4Q9C037 500 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 KLHL25Q9H0H3 589 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TFB2MQ9H5Q4 396 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 KCND3Q9UK17 655 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 BTRCQ9Y297 605 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TCAF1Q9Y4C2 921 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PCDHB3Q9Y5E6 796 aa18.51■□□□□ 0.55
TNFRSF1A-212ENST00000539372 MATN2O00339 956 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 QSOX1O00391 747 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 SCRG1O75711 98 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 FGGP02679 453 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 FURINP09958 794 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 CSE1LP55060 971 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PRAMEP78395 509 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 SEMA3AQ14563 771 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 SYTL3Q4VX76 610 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 FAM199XQ6PEV8 388 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ZNF534Q76KX8 674 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 TMEM135Q86UB9 458 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PTRH1Q86Y79 214 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 CARFQ8N187 725 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PPHLN1Q8NEY8 458 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 OR4L1Q8NH43 312 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 APOBEC4Q8WW27 367 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 C1GALT1Q9NS00 363 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 KCND1Q9NSA2 647 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ICKQ9UPZ9 632 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ASF1AQ9Y294 204 aa18.5■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PIPSLA2A3N6 862 aa18.49■□□□□ 0.55
TNFRSF1A-212ENST00000539372 CDC14CA4D256 554 aa18.49■□□□□ 0.55
TNFRSF1A-212ENST00000539372 CPNE3O75131 537 aaKnown RBP18.49■□□□□ 0.55
TNFRSF1A-212ENST00000539372 PVRP15151 417 aa18.49■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ST6GAL1P15907 406 aa18.49■□□□□ 0.55
TNFRSF1A-212ENST00000539372 ACADLP28330 430 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms