RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 USP7Q93009 1102 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 ZDHHC12Q96GR4 267 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 C9orf72Q96LT7 481 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 BIRC8Q96P09 236 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 TGM7Q96PF1 710 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 TSSK1BQ9BXA7 367 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 MVB12BQ9H7P6 319 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 IL1RAPL1Q9NZN1 696 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 SEMA5BQ9P283 1151 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 KLHL3Q9UH77 587 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 ACSL6Q9UKU0 697 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 MAD1L1Q9Y6D9 718 aa8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
LRTOMT-216ENST00000539271 UBA6A0AVT1 1052 aaPredicted RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 OR5K3A6NET4 321 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 EFCAB7A8K855 629 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 C9orf172C9J069 976 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PFDN6O15212 129 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 TP73O15350 636 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 RRP8O43159 456 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 KIF1CO43896 1103 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PRAMEF10O60809 474 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 GPC4O75487 556 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 BANF1O75531 89 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 S1PR4O95977 384 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ESR1P03372 595 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 APOA4P06727 396 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PGAM1P18669 254 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 RPL21P46778 160 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ITGA8P53708 1063 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 MAPK10P53779 464 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 EIF3BP55884 814 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PPP1CAP62136 330 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 THOC5Q13769 683 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 KRT33BQ14525 404 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 CRYMQ14894 314 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 LONRF1Q17RB8 773 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 BBS9Q3SYG4 887 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 CTSL3PQ5NE16 218 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ZNF470Q6ECI4 717 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PTRHD1Q6GMV3 140 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 IRGCQ6NXR0 463 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 CENPUQ71F23 418 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ZNF572Q7Z3I7 529 aaPredicted RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 OOSP2Q86WS3 158 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 FAM129CQ86XR2 697 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 VRK3Q8IV63 474 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 IGDCC3Q8IVU1 814 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 SLC22A15Q8IZD6 547 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PDIK1LQ8N165 341 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 KRT222Q8N1A0 295 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PHC3Q8NDX5 983 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ASZ1Q8WWH4 475 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PMEPA1Q969W9 287 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 SNF8Q96H20 258 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 C16orf45Q96MC5 204 aaPredicted RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PANX3Q96QZ0 392 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 TAAR9Q96RI9 348 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 FERD3LQ96RJ6 166 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 EBNA1BP2Q99848 306 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 NAT9Q9BTE0 207 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ZNF768Q9H5H4 540 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 INTS10Q9NVR2 710 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 OCIAD1Q9NX40 245 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 SIDT1Q9NXL6 827 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 FOXJ2Q9P0K8 574 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 CDYLQ9Y232 598 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 PCDHGA3Q9Y5H0 932 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 FAM169AQ9Y6X4 670 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 ANKRD12Q6UB98 2062 aa8.74□□□□□ -1.01
LRTOMT-216ENST00000539271 OR6C74A6NCV1 312 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 FAM187AA6NFU0 413 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 EFCAB8A8MWE9 144 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 H3BMM5 538 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 KPNA5O15131 536 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 RAD51CO43502 376 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 SLCO2B1O94956 709 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 TTC4O95801 387 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 CD82P27701 267 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 ITPKBP27987 946 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 FMO4P31512 558 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 SLC1A2P43004 574 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 CSE1LP55060 971 aaKnown RBP8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 RAB15P59190 212 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 MRPS25P82663 173 aaKnown RBP8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 MC2RQ01718 297 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 TLE3Q04726 772 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 C2orf54Q08AI8 447 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 HSPA14Q0VDF9 509 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 CBLBQ13191 982 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 PRKG2Q13237 762 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 TMED2Q15363 201 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 HIF1AQ16665 826 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 ZNF789Q5FWF6 425 aa8.73□□□□□ -1.01
LRTOMT-216ENST00000539271 SPANXN3Q5MJ09 141 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms