RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PSMA1P25786 263 aaKnown RBP16.56■□□□□ 0.24
SCARB1-205ENST00000538291 NRG3P56975 720 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 CBFBQ13951 182 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 LRRC32Q14392 662 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 HGSNATQ68CP4 663 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 IQCF2Q8IXL9 164 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 TMEM145Q8NBT3 493 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 MCFD2Q8NI22 146 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 SMPDL3BQ92485 455 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 PIGKQ92643 395 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 LRRC73Q5JTD7 316 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 MBLAC2Q68D91 279 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 GDPD4Q6W3E5 623 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 ZNF599Q96NL3 588 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 ALG2Q9H553 416 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 GPN1Q9HCN4 374 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-205ENST00000538291 SIRPGQ9P1W8 387 aa16.56■□□□□ 0.24
SCARB1-205ENST00000538291 LOC110117498-PIK3R3F6TDL0 507 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 DHFRP00374 187 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 C9P02748 559 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 PBX1P40424 430 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 JAM2P57087 298 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 GHRHRQ02643 423 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ADGRF1Q5T601 910 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 LPGAT1Q92604 370 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 TMEM175Q9BSA9 504 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 XPNPEP1Q9NQW7 623 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 DMTF1Q9Y222 760 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CPED1A4D0V7 1026 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 PRORSD1PA6NEY8 169 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ADH5P11766 374 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 REP15Q6BDI9 236 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 RBM44Q6ZP01 1051 aaKnown RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 GLB1L3Q8NCI6 653 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CLEC4AQ9UMR7 237 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CPSF4LA6NMK7 179 aaKnown RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ACP5P13686 325 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 RABGGTBP53611 331 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 RPS14P62263 151 aaKnown RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CCL14Q16627 93 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ANKRD22Q5VYY1 191 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CYP2U1Q7Z449 544 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ANKRD46Q86W74 232 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 TPK1Q9H3S4 243 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ATXN10Q9UBB4 475 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 SLC30A4O14863 429 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 NOL4O94818 638 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 AHCYP23526 432 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 SDC2P34741 201 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CDH12P55289 794 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 ZZZ3Q8IYH5 903 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 GIPC3Q8TF64 312 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 C11orf24Q96F05 449 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 HBEGFQ99075 208 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 CHMP1AQ9HD42 196 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-205ENST00000538291 MARK1Q9P0L2 795 aa16.55■□□□□ 0.24
SCARB1-205ENST00000538291 TCRBV7S2A1N4TA0A589 114 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 PLIN3O60664 434 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 TULP3O75386 442 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 DBIP07108 87 aaKnown RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ITGA3P26006 1051 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 OC90Q02509 493 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 CELF5Q8N6W0 485 aaKnown RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 OR2AJ1Q8NGZ0 328 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 COMMD4Q9H0A8 199 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ZNF282Q9UDV7 671 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 RGS17Q9UGC6 210 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 SRRDQ9UH36 339 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 MED31Q9Y3C7 131 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 THRBP10828 461 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 NELFEP18615 380 aaKnown RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ASPAP45381 313 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 RPS24P62847 133 aaKnown RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 IFI44LQ53G44 452 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ARSIQ5FYB1 569 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ARHGAP22Q7Z5H3 698 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 AVL9Q8NBF6 648 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 PIP5K1BO14986 540 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 NPHS1O60500 1241 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 CCR8P51685 355 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 SLC9B1Q4ZJI4 515 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 PCDH19Q8TAB3 1148 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 CIB1Q99828 191 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 ITM2CQ9NQX7 267 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 A0A0X1KG70 313 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 PTX3P26022 381 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 MBOAT1Q6ZNC8 495 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 MMAAQ8IVH4 418 aaKnown RBP16.54■□□□□ 0.24
SCARB1-205ENST00000538291 CCDC54Q8NEL0 328 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 NTAN1Q96AB6 310 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 S100A14Q9HCY8 104 aa16.54■□□□□ 0.24
SCARB1-205ENST00000538291 DNAAF2Q9NVR5 837 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms