RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 DSC1Q08554 894 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 EPS8Q12929 822 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 GRIK2Q13002 908 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 VEPH1Q14D04 833 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 IGFBP7Q16270 282 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 RPE65Q16518 533 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 QRICH1Q2TAL8 776 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 USP41Q3LFD5 358 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 LINC00303Q3SY05 128 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 FAM133BQ5BKY9 247 aaKnown RBP4.04□□□□□ -1.76
SNHG1-203ENST00000537024 VWA5B1Q5TIE3 1220 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 FUT10Q6P4F1 479 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 KLHL35Q6PF15 583 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 LRIG3Q6UXM1 1119 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 CYB5R4Q7L1T6 521 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 GPAT4Q86UL3 456 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 WDR63Q8IWG1 891 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 WDTC1Q8N5D0 677 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 PNLDC1Q8NA58 520 aaKnown RBP4.04□□□□□ -1.76
SNHG1-203ENST00000537024 FAR1Q8WVX9 515 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 RLN3Q8WXF3 142 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 RITA1Q96K30 269 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 CMTM3Q96MX0 182 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 TIMP4Q99727 224 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 H2AFJQ9BTM1 129 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 DUSP26Q9BV47 211 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 TM2D2Q9BX73 214 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 FBRSL1Q9HCM7 1045 aaKnown RBP4.04□□□□□ -1.76
SNHG1-203ENST00000537024 PLSCR4Q9NRQ2 329 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 ASB6Q9NWX5 421 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 GRHL1Q9NZI5 618 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 NCKIPSDQ9NZQ3 722 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 ADAM21Q9UKJ8 722 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 MKLN1Q9UL63 735 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 BTBD3Q9Y2F9 522 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNHG1-203ENST00000537024 WNT6Q9Y6F9 365 aa4.04□□□□□ -1.76
SNHG1-203ENST00000537024 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
SNHG1-203ENST00000537024 APCP25054 2843 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 ESYT2A0FGR8 921 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 ZNF197O14709 1029 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 KIF1CO43896 1103 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 MOSPD3O75425 235 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 SEC31AO94979 1220 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 LUC7L3O95232 432 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 C22orf31O95567 290 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 PLAUP00749 431 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 RNF224P0DH78 156 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TOP1P11387 765 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 DARSP14868 501 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TFEBP19484 476 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TDO2P48775 406 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 GNAQP50148 359 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 STK4Q13043 487 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 FRG1Q14331 258 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 PSMD5Q16401 504 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 ME3Q16798 604 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 ITPRIPL2Q3MIP1 535 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 SARM1Q6SZW1 724 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 CCDC25Q86WR0 208 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 DHX40Q8IX18 779 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 ADGRF2Q8IZF7 708 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 AMER2Q8N7J2 671 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 KCNE4Q8WWG9 221 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 NEU4Q8WWR8 484 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 LARP4BQ92615 738 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 GTF3C6Q969F1 213 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 JAKMIP2Q96AA8 810 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 MAP7D2Q96T17 732 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 SEMA3CQ99985 751 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TMEM47Q9BQJ4 181 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 FRMD8Q9BZ67 464 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 CXorf56Q9H5V9 222 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 HAO1Q9UJM8 370 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TLK1Q9UKI8 766 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 PACSIN3Q9UKS6 424 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 INTS6Q9UL03 887 aaKnown RBP4.03□□□□□ -1.76
SNHG1-203ENST00000537024 A4GNTQ9UNA3 340 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 CAPN7Q9Y6W3 813 aa4.03□□□□□ -1.76
SNHG1-203ENST00000537024 TMEM131Q92545 1883 aa4.03□□□□□ -1.77
SNHG1-203ENST00000537024 NBEAL1Q6ZS30 2694 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CNTNAP2Q9UHC6 1331 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.779e-27■■■■□ 23
SNHG1-203ENST00000537024 SLC22A23A1A5C7 686 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 ARHGEF37A1IGU5 675 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 VPS37CA5D8V6 355 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 DPPA5A6NC42 116 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 AP5Z1O43299 807 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 LIASO43766 372 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PAGE4O60829 102 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 PPFIA2O75334 1257 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 BEST1O76090 585 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 DNTTP04053 509 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CD63P08962 238 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 GOLGA8HP0CJ92 632 aa4.02□□□□□ -1.77
SNHG1-203ENST00000537024 CYP2A6P11509 494 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-203ENST00000537024 SFTPCP11686 197 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms