RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GRSF1Q12849 480 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 FAM174BQ3ZCQ3 159 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 GPR33Q49SQ1 333 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 KIAA1841Q6NSI8 718 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 RETSATQ6NUM9 610 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 STK32CQ86UX6 486 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 CLEC4FQ8N1N0 589 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 ZBTB2Q8N680 514 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 DCAF4L2Q8NA75 395 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 HJURPQ8NCD3 748 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 CCDC97Q96F63 343 aaPredicted RBP15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 CLSTN3Q9BQT9 956 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 RDH14Q9HBH5 336 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 PLGRKTQ9HBL7 147 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 ASIC5Q9NY37 505 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 DNAJB9Q9UBS3 223 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 GMEB1Q9Y692 573 aa15.73■□□□□ 0.11
CHMP1A-202ENST00000535997 C1orf232A0A0U1RR37 186 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 TRIM64BA6NI03 449 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 G3V2T6 193 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 K7EPI3 171 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 ARHGEF15O94989 841 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 PGRP06401 933 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 THRBP10828 461 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 ACRV1P26436 265 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 GDF5P43026 501 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 SMAD3P84022 425 aaKnown RBP15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 PHKG1Q16816 387 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 MACC1Q6ZN28 852 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 OR10A6Q8NH74 314 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 UBTD2Q8WUN7 234 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 FIG4Q92562 907 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 HTATIP2Q9BUP3 242 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 WWOXQ9NZC7 414 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 TRPS1Q9UHF7 1281 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 ADGRE2Q9UHX3 823 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 PRSS21Q9Y6M0 314 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 TET1Q8NFU7 2136 aa15.72■□□□□ 0.11
CHMP1A-202ENST00000535997 A0A0J9YVX5 310 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 H3BMQ9 156 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 PCNAP12004 261 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 EPB42P16452 691 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CA5AP35218 305 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CSKP41240 450 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 PLIN5Q00G26 463 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 BCL2L1Q07817 233 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CYP4F3Q08477 520 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 EPS8Q12929 822 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CDH18Q13634 790 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 GPR107Q5VW38 600 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 TTC23Q5W5X9 447 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 TPGS2Q68CL5 300 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 LHX8Q68G74 356 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNF773Q6PK81 442 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNF548Q8NEK5 533 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 DNAJB8Q8NHS0 232 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 SDCCAG3Q96C92 435 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 COG8Q96MW5 612 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 C2orf49Q9BVC5 232 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 APOL5Q9BWW9 433 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 TM6SF2Q9BZW4 377 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ING2Q9H160 280 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 LATS2Q9NRM7 1088 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 TMEM9Q9P0T7 183 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 SRRDQ9UH36 339 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNF490Q9ULM2 529 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ELOVL7A1L3X0 281 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 K7ERQ8 282 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 FFAR3O14843 346 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 GPR42O15529 346 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 SEC22BO75396 215 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 SCELO95171 688 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ATE1O95260 518 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CPNE6O95741 557 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 MBL2P11226 248 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 TCF3P15923 654 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 JUNBP17275 347 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 MAPK8P45983 427 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 STT3AP46977 705 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CSNK1DP48730 415 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 PLD1Q13393 1074 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 MYBPC3Q14896 1274 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CDKN3Q16667 212 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ZIK1Q3SY52 487 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 FAM117BQ6P1L5 589 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 THAP5Q7Z6K1 395 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ITIH5Q86UX2 942 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CBARPQ8N350 705 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 LKAAEAR1Q8TD35 194 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 SLC22A17Q8WUG5 538 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 POP5Q969H6 163 aaKnown RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 CLMPQ9H6B4 373 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 LRTM1Q9HBL6 345 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 FARSBQ9NSD9 589 aaKnown RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 KLQ9UEF7 1012 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 ZNHIT2Q9UHR6 403 aa15.71■□□□□ 0.11
CHMP1A-202ENST00000535997 GLYATL1P3A0A0U1RQE8 302 aa15.7■□□□□ 0.1
CHMP1A-202ENST00000535997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms