RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TCRBV21S2A2	A0A5A6	115 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MEI4	A8MW99	385 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442		F8W810	466 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZNF197	O14709	1029 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	BCAT2	O15382	392 aa	Predicted RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	JAK2	O60674	1132 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZG16	O60844	167 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CBX6	O95503	412 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PLAU	P00749	431 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SERPINC1	P01008	464 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HLA-DQA2	P01906	255 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SPARC	P09486	303 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CYP2A6	P11509	494 aa	Predicted RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ALOX12	P18054	663 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GPD1	P21695	349 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ARL3	P36405	182 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ARL1	P40616	181 aa	Predicted RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HADHA	P40939	763 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CSNK1E	P49674	416 aa	Known RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IST1	P53990	364 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RPL7A	P62424	266 aa	Known RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	YPEL5	P62699	121 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CYP4A11	Q02928	519 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMEM115	Q12893	351 aa	Predicted RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CCNG2	Q16589	344 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZRANB3	Q5FWF4	1079 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HMBOX1	Q6NT76	420 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MOB3C	Q70IA8	216 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRSS45	Q7RTY3	260 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GALNT5	Q7Z7M9	940 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	UEVLD	Q8IX04	471 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GHDC	Q8N2G8	530 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EID2	Q8N6I1	236 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PDILT	Q8N807	584 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PNLDC1	Q8NA58	520 aa	Known RBP	4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GPR150	Q8NGU9	434 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SLC29A3	Q9BZD2	475 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ATP8A2	Q9NTI2	1148 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C20orf141	Q9NUB4	165 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NYAP2	Q9P242	653 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ARMCX1	Q9P291	453 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CLIP2	Q9UDT6	1046 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TLK1	Q9UKI8	766 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TNFSF13B	Q9Y275	285 aa		4.55	□□□□□ -1.68
ECHDC1-223	ENST00000534442		A0A087X1B8	175 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CYP2D7	A0A087X1C5	515 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442		A0A0U1RQF3	1178 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KRTAP9-6	A0A140TA67	174 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SLC22A23	A1A5C7	686 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMEM247	A6NEH6	219 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	AGAP14	A8MT82	685 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KRTAP9-7	A8MTY7	169 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442		K7EM74	188 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GTPBP1	O00178	669 aa	Known RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	AP3D1	O14617	1153 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMCC2	O75069	709 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	MOSPD3	O75425	235 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SEC14L2	O76054	403 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TNFSF15	O95150	251 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	UQCRFS1P1	P0C7P4	283 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TACR3	P29371	465 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CPOX	P36551	454 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CPA2	P48052	419 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EIF3B	P55884	814 aa	Known RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IRX6	P78412	446 aa	Predicted RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NUCB1	Q02818	461 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CUL4A	Q13619	759 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PGM5	Q15124	567 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TEAD2	Q15562	447 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	C5orf22	Q49AR2	442 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRR30	Q53SZ7	412 aa	Predicted RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	PRAMEF17	Q5VTA0	474 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FAM171A1	Q5VUB5	890 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CDC73	Q6P1J9	531 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KLHL24	Q6TFL4	600 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	OLFML1	Q6UWY5	402 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KRBA2	Q6ZNG9	492 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IKBIP	Q70UQ0	350 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	RRM2B	Q7LG56	351 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TADA2B	Q86TJ2	420 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TRIM74	Q86UV6	250 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TRIM73	Q86UV7	250 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	LDLRAD3	Q86YD5	345 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	OR8H2	Q8N162	312 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ARL14	Q8N4G2	192 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TTC39C	Q8N584	583 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FAM47B	Q8NA70	645 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	GMCL1P1	Q8NEA9	526 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	DNASE2B	Q8WZ79	361 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	IGSF8	Q969P0	613 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	FRG2B	Q96QU4	278 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TAAR1	Q96RJ0	339 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	TMEM175	Q9BSA9	504 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	EFHD1	Q9BUP0	239 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	KRTAP9-2	Q9BYQ4	174 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	CCDC68	Q9H2F9	335 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	ZNF304	Q9HCX3	659 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	HPS4	Q9NQG7	708 aa		4.54	□□□□□ -1.68
ECHDC1-223	ENST00000534442	SNTG1	Q9NSN8	517 aa		4.54	□□□□□ -1.68

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