RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CDYLQ9Y232 598 aa10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 ASF1AQ9Y294 204 aa10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 MED16Q9Y2X0 877 aa10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 MTO1Q9Y2Z2 717 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 PCDHGA1Q9Y5H4 931 aa10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 CFAP20Q9Y6A4 193 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 U3KQA8 63 aa10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-211ENST00000533012 SPAARA0A1B0GVQ0 90 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 EXOC1LA0A1B0GW35 172 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM155BO75949 473 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 RPN2P04844 631 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 ENO3P13929 434 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 FDXRP22570 491 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 ALDH4A1P30038 563 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 ATP5DP30049 168 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 ACADVLP49748 655 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 RGS4P49798 205 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 LIMK2P53671 638 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 TIAL1Q01085 375 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 GBX1Q14549 363 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CCDC157Q569K6 752 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 ACSBG2Q5FVE4 666 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 LRRC8EQ6NSJ5 796 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 TTC23LQ6PF05 361 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 PAQR3Q6TCH7 311 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 VRK3Q8IV63 474 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 Q8N9G6 341 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 PHC3Q8NDX5 983 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CFAP61Q8NHU2 1237 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CD200R1Q8TD46 325 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC44A1Q8WWI5 657 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CAVIN3Q969G5 261 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CCDC74AQ96AQ1 378 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC30A3Q99726 388 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 OLFM1Q99784 485 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 CCDC3Q9BQI4 270 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 TRIT1Q9H3H1 467 aaKnown RBP10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 UCK1Q9HA47 277 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 SYTL2Q9HCH5 934 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC40A1Q9NP59 571 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC39A10Q9ULF5 831 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 PLXNB3Q9ULL4 1909 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM186AA6NE01 2351 aa10.97□□□□□ -0.65
TRAPPC4-211ENST00000533012 PRAMEF33A0A0G2JMD5 474 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 EIF3FO00303 357 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 GIPC1O14908 333 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 KDM1AO60341 852 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 RFPL3O75679 317 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 KRT38O76015 456 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 ITGA2BP08514 1039 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 MPC1LP0DKB6 136 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 STMN1P16949 149 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 KCNA4P22459 653 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 HSD17B3P37058 310 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 MAPK9P45984 424 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 ID4P47928 161 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 PPM1FP49593 454 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 SERPINB9P50453 376 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 TAS2R39P59534 338 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 IL2P60568 153 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 PERM1Q5SV97 790 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 MROH9Q5TGP6 573 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 UNC5DQ6UXZ4 953 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 TMEM26Q6ZUK4 368 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 NEK10Q6ZWH5 1172 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 TAOK1Q7L7X3 1001 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 HDXQ7Z353 690 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF438Q7Z4V0 828 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 PIM3Q86V86 326 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 CPNE9Q8IYJ1 553 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 TBC1D21Q8IYX1 336 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 ACVR1CQ8NER5 493 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 GIMAP7Q8NHV1 300 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 WDR48Q8TAF3 677 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 MAGEC3Q8TD91 643 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 EEF1AKMT1Q8WVE0 214 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 AHCYL2Q96HN2 611 aaKnown RBP10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 PKNOX2Q96KN3 472 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 PAFAH2Q99487 392 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 GPR22Q99680 433 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 EPB41L4BQ9H329 900 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 POPDC3Q9HBV1 291 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 KCNK4Q9NYG8 393 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 FETUBQ9UGM5 382 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 POLG2Q9UHN1 485 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 ZNF180Q9UJW8 692 aa10.96□□□□□ -0.65
TRAPPC4-211ENST00000533012 LRP4O75096 1905 aa10.96□□□□□ -0.66
TRAPPC4-211ENST00000533012 GVINP1Q7Z2Y8 2422 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 B4GAT1O43505 415 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 ZBTB14O43829 449 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 KRT37O76014 449 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 MATN4O95460 622 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 FTH1P19P0C7X4 201 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 CNTFP26441 200 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 CRABP2P29373 138 aa10.95□□□□□ -0.66
TRAPPC4-211ENST00000533012 CCNFP41002 786 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms